RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ZSCAN29Q8IWY8 852 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-204ENST00000526468 ZGPATQ8N5A5 531 aaKnown RBP14.56□□□□□ -0.08
CAPN1-204ENST00000526468 RAET1EQ8TD07 263 aa14.56□□□□□ -0.08
CAPN1-204ENST00000526468 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
CAPN1-204ENST00000526468 FMNL1O95466 1100 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-204ENST00000526468 OSBPP22059 807 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 CTGFP29279 349 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 RASGRF1Q13972 1273 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
CAPN1-204ENST00000526468 PICK1Q9NRD5 415 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 ZNF112Q9UJU3 913 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 GAKO14976 1311 aa14.55□□□□□ -0.08
CAPN1-204ENST00000526468 FCGRTP55899 365 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 PICALMQ13492 652 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 CCDC102BQ68D86 513 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 GADL1Q6ZQY3 521 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 SCYL3Q8IZE3 742 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 MEIS3Q99687 375 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 NOB1Q9ULX3 412 aaKnown RBP14.54□□□□□ -0.08
CAPN1-204ENST00000526468 HDAC5Q9UQL6 1122 aa14.54□□□□□ -0.08
CAPN1-204ENST00000526468 MROH7-TTC4A0A0A0MT08 1334 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 PDS5AQ29RF7 1337 aaKnown RBP14.53□□□□□ -0.08
CAPN1-204ENST00000526468 CYP2C8P10632 490 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 HOXD10P28358 340 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 BTDP43251 543 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 MOGSQ13724 837 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 MTFR1Q15390 333 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 MYH7P12883 1935 aa14.53□□□□□ -0.08
CAPN1-204ENST00000526468 COL2A1P02458 1487 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-204ENST00000526468 ENTPD3O75355 529 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-204ENST00000526468 GRK4P32298 578 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 PRKCZQ05513 592 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 SLF2Q8IX21 1173 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 IDI2Q9BXS1 227 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 COPRSQ9NQ92 184 aa14.52□□□□□ -0.09
CAPN1-204ENST00000526468 BIN2Q9UBW5 565 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-204ENST00000526468 A0A0G2JLL6 359 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 H0YGN5 161 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 CXCL11O14625 94 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 SRGAP3O43295 1099 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 BCRP11274 1271 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 FXR1P51114 621 aaKnown RBP eCLIP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 MVPQ14764 893 aaKnown RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 PRRT2Q7Z6L0 340 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 ZHX2Q9Y6X8 837 aa14.51□□□□□ -0.09
CAPN1-204ENST00000526468 RANBP2P49792 3224 aaKnown RBP14.51□□□□□ -0.09
CAPN1-204ENST00000526468 TRIM75PA6NK02 468 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 PHF20L1A8MW92 1017 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 CCL5P13501 91 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 PTPRAP18433 802 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 UBXN2AP68543 259 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-204ENST00000526468 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 SH3BP5LQ7L8J4 393 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 FASTKD5Q7L8L6 764 aaKnown RBP14.5□□□□□ -0.09
CAPN1-204ENST00000526468 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 XAGE2Q96GT9 111 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
CAPN1-204ENST00000526468 DDX4Q9NQI0 724 aaKnown RBP14.5□□□□□ -0.09
CAPN1-204ENST00000526468 DDTLA6NHG4 134 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-204ENST00000526468 FAM196BA6NMK8 535 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 SLURP2P0DP57 97 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 TFCP2Q12800 502 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 CCDC84Q86UT8 332 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-204ENST00000526468 NKX2-3Q8TAU0 364 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 RNF208Q9H0X6 261 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 AKAP2Q9Y2D5 859 aa14.49□□□□□ -0.09
CAPN1-204ENST00000526468 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 TNPO2O14787 897 aaKnown RBP14.48□□□□□ -0.09
CAPN1-204ENST00000526468 GNAI3P08754 354 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 TIMM10P62072 90 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 MECOMQ03112 1051 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 GORABQ5T7V8 394 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 PI16Q6UXB8 463 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
CAPN1-204ENST00000526468 DPF3Q92784 378 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 GABRQQ9UN88 632 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 SLC45A1Q9Y2W3 748 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 AFG3L2Q9Y4W6 797 aa14.48□□□□□ -0.09
CAPN1-204ENST00000526468 ZBTB22O15209 634 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
CAPN1-204ENST00000526468 FARP2O94887 1054 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-204ENST00000526468 GJB1P08034 283 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 ELNP15502 786 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 GJA8P48165 433 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 HTATIP2Q9BUP3 242 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 UNC93B1Q9H1C4 597 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms