RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 A0A0G2JLL6 359 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-201ENST00000526271 GNRH1P01148 92 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 LDHBP07195 334 aaKnown RBP17.82■□□□□ 0.44
CPSF1-201ENST00000526271 PTPRAP18433 802 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 RHBDL3P58872 404 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 TIMM10P62072 90 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 ARHGEF6Q15052 776 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 PRRT2Q7Z6L0 340 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-201ENST00000526271 HOOK2Q96ED9 719 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
CPSF1-201ENST00000526271 AFG3L2Q9Y4W6 797 aa17.82■□□□□ 0.44
CPSF1-201ENST00000526271 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 GRK4P32298 578 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 PRMT2P55345 433 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 RRP1BQ14684 758 aaKnown RBP17.81■□□□□ 0.44
CPSF1-201ENST00000526271 KIF22Q14807 665 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 CDK5RAP2Q96SN8 1893 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 MYO5AQ9Y4I1 1855 aaKnown RBP17.81■□□□□ 0.44
CPSF1-201ENST00000526271 PLXNB2O15031 1838 aa17.81■□□□□ 0.44
CPSF1-201ENST00000526271 CXCL11O14625 94 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
CPSF1-201ENST00000526271 CCL5P13501 91 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 PI16Q6UXB8 463 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 SCYL3Q8IZE3 742 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 DENND2AQ9ULE3 1009 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 ZHX2Q9Y6X8 837 aa17.8■□□□□ 0.44
CPSF1-201ENST00000526271 FAM196BA6NMK8 535 aa17.79■□□□□ 0.44
CPSF1-201ENST00000526271 ENTPD3O75355 529 aa17.79■□□□□ 0.44
CPSF1-201ENST00000526271 IL15P40933 162 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-201ENST00000526271 GJA8P48165 433 aa17.79■□□□□ 0.44
CPSF1-201ENST00000526271 UNC93B1Q9H1C4 597 aa17.79■□□□□ 0.44
CPSF1-201ENST00000526271 SEMA3EO15041 775 aa17.78■□□□□ 0.44
CPSF1-201ENST00000526271 FMNL1O95466 1100 aaPredicted RBP17.78■□□□□ 0.44
CPSF1-201ENST00000526271 GJB1P08034 283 aa17.78■□□□□ 0.44
CPSF1-201ENST00000526271 FAM163AQ96GL9 167 aaPredicted RBP17.78■□□□□ 0.44
CPSF1-201ENST00000526271 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
CPSF1-201ENST00000526271 PDS5AQ29RF7 1337 aaKnown RBP17.77■□□□□ 0.44
CPSF1-201ENST00000526271 TREML2Q5T2D2 321 aa17.77■□□□□ 0.44
CPSF1-201ENST00000526271 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
CPSF1-201ENST00000526271 XAGE2Q96GT9 111 aa17.77■□□□□ 0.44
CPSF1-201ENST00000526271 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
CPSF1-201ENST00000526271 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 COL6A3P12111 3177 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 A0A1B0GUL7 405 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 ELNP15502 786 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 BTDP43251 543 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 MECOMQ03112 1051 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 TFCP2Q12800 502 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 RAET1EQ8TD07 263 aa17.76■□□□□ 0.43
CPSF1-201ENST00000526271 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 FLT3LGP49771 235 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 JAG1P78504 1218 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 MTX1Q13505 466 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
CPSF1-201ENST00000526271 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
CPSF1-201ENST00000526271 HMG20BQ9P0W2 317 aa17.75■□□□□ 0.43
CPSF1-201ENST00000526271 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
CPSF1-201ENST00000526271 FCGRTP55899 365 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 PICALMQ13492 652 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 GADL1Q6ZQY3 521 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 FOCADQ5VW36 1801 aa17.74■□□□□ 0.43
CPSF1-201ENST00000526271 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
CPSF1-201ENST00000526271 INHAP05111 366 aa17.73■□□□□ 0.43
CPSF1-201ENST00000526271 HOXD10P28358 340 aa17.73■□□□□ 0.43
CPSF1-201ENST00000526271 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
CPSF1-201ENST00000526271 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
CPSF1-201ENST00000526271 SLC45A1Q9Y2W3 748 aa17.73■□□□□ 0.43
CPSF1-201ENST00000526271 ADCY3O60266 1144 aa17.72■□□□□ 0.43
CPSF1-201ENST00000526271 PEX10O60683 326 aa17.72■□□□□ 0.43
CPSF1-201ENST00000526271 SGPL1O95470 568 aa17.72■□□□□ 0.43
CPSF1-201ENST00000526271 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
CPSF1-201ENST00000526271 SLAIN1Q8ND83 568 aa17.72■□□□□ 0.43
CPSF1-201ENST00000526271 PICK1Q9NRD5 415 aa17.72■□□□□ 0.43
CPSF1-201ENST00000526271 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 TBC1D12O60347 775 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 MCAMP43121 646 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 MNX1P50219 401 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 IRF5Q13568 498 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 DPF3Q92784 378 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 PAK6Q9NQU5 681 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-201ENST00000526271 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
CPSF1-201ENST00000526271 MAST2Q6P0Q8 1798 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms