RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
USH1C-203ENST00000526181 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
USH1C-203ENST00000526181 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
USH1C-203ENST00000526181 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
USH1C-203ENST00000526181 HMMRO75330 724 aa16.45■□□□□ 0.22
USH1C-203ENST00000526181 INHBEP58166 350 aa16.45■□□□□ 0.22
USH1C-203ENST00000526181 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
USH1C-203ENST00000526181 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 TESPA1A2RU30 521 aaPredicted RBP16.44■□□□□ 0.22
USH1C-203ENST00000526181 GPR25O00155 361 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 LDHCP07864 332 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
USH1C-203ENST00000526181 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
USH1C-203ENST00000526181 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 CFHR5Q9BXR6 569 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 CHMP4BQ9H444 224 aaKnown RBP16.44■□□□□ 0.22
USH1C-203ENST00000526181 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 DOCK2Q92608 1830 aa16.44■□□□□ 0.22
USH1C-203ENST00000526181 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
USH1C-203ENST00000526181 ALDH1A1P00352 501 aa16.43■□□□□ 0.22
USH1C-203ENST00000526181 CCL15Q16663 113 aa16.43■□□□□ 0.22
USH1C-203ENST00000526181 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
USH1C-203ENST00000526181 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
USH1C-203ENST00000526181 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
USH1C-203ENST00000526181 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
USH1C-203ENST00000526181 IRF6O14896 467 aa16.42■□□□□ 0.22
USH1C-203ENST00000526181 GTF2A2P52657 109 aa16.42■□□□□ 0.22
USH1C-203ENST00000526181 CRHR2Q13324 411 aa16.42■□□□□ 0.22
USH1C-203ENST00000526181 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
USH1C-203ENST00000526181 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
USH1C-203ENST00000526181 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
USH1C-203ENST00000526181 IDH1O75874 414 aaKnown RBP16.41■□□□□ 0.22
USH1C-203ENST00000526181 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
USH1C-203ENST00000526181 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
USH1C-203ENST00000526181 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
USH1C-203ENST00000526181 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
USH1C-203ENST00000526181 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
USH1C-203ENST00000526181 RAB11FIP3O75154 756 aa16.4■□□□□ 0.22
USH1C-203ENST00000526181 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
USH1C-203ENST00000526181 PPATQ06203 517 aa16.4■□□□□ 0.22
USH1C-203ENST00000526181 PPIL2Q13356 520 aa16.4■□□□□ 0.22
USH1C-203ENST00000526181 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
USH1C-203ENST00000526181 NOL9Q5SY16 702 aaKnown RBP16.4■□□□□ 0.22
USH1C-203ENST00000526181 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
USH1C-203ENST00000526181 FKTNO75072 461 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 BAG3O95817 575 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 CYP7A1P22680 504 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 MAP3K10Q02779 954 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
USH1C-203ENST00000526181 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 COL2A1P02458 1487 aaPredicted RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 MYO5AQ9Y4I1 1855 aaKnown RBP16.39■□□□□ 0.21
USH1C-203ENST00000526181 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
USH1C-203ENST00000526181 MAP4K4O95819 1239 aaPredicted RBP16.38■□□□□ 0.21
USH1C-203ENST00000526181 CETPP11597 493 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 PPP4CP60510 307 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 FLT1P17948 1338 aa16.38■□□□□ 0.21
USH1C-203ENST00000526181 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
USH1C-203ENST00000526181 TAF1CQ15572 869 aaPredicted RBP16.37■□□□□ 0.21
USH1C-203ENST00000526181 CCDC84Q86UT8 332 aaPredicted RBP16.37■□□□□ 0.21
USH1C-203ENST00000526181 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
USH1C-203ENST00000526181 DNAJC2Q99543 621 aaKnown RBP16.37■□□□□ 0.21
USH1C-203ENST00000526181 KCNH4Q9UQ05 1017 aa16.37■□□□□ 0.21
USH1C-203ENST00000526181 GOLIM4O00461 696 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 PLCG2P16885 1265 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 PTPRAP18433 802 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 CAP1Q01518 475 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 MOGSQ13724 837 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 RRP1BQ14684 758 aaKnown RBP16.36■□□□□ 0.21
USH1C-203ENST00000526181 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
USH1C-203ENST00000526181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.21
USH1C-203ENST00000526181 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 TBC1D12O60347 775 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 IGSF3O75054 1194 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 MAP3K12Q12852 859 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.35■□□□□ 0.21
USH1C-203ENST00000526181 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
USH1C-203ENST00000526181 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 ZHX2Q9Y6X8 837 aa16.35■□□□□ 0.21
USH1C-203ENST00000526181 DOCK1Q14185 1865 aa16.34■□□□□ 0.21
USH1C-203ENST00000526181 CTNND1O60716 968 aaKnown RBP16.34■□□□□ 0.21
USH1C-203ENST00000526181 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
USH1C-203ENST00000526181 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
USH1C-203ENST00000526181 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
USH1C-203ENST00000526181 PALD1Q9ULE6 856 aa16.34■□□□□ 0.21
USH1C-203ENST00000526181 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms