RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
CSDE1-210ENST00000525878 PLD6Q8N2A8 252 aaKnown RBP8.27□□□□□ -1.09
CSDE1-210ENST00000525878 NETO1Q8TDF5 533 aa8.27□□□□□ -1.09
CSDE1-210ENST00000525878 KCNB2Q92953 911 aa8.27□□□□□ -1.09
CSDE1-210ENST00000525878 PCOLCE2Q9UKZ9 415 aa8.27□□□□□ -1.09
CSDE1-210ENST00000525878 PAPLNO95428 1278 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 NME2P22392 152 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 ERVK-24P63145 666 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSDE1-210ENST00000525878 NXPE4Q6UWF7 544 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 POU5F2Q8N7G0 328 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 FAM181AQ8N9Y4 354 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 DUSP23Q9BVJ7 150 aa8.26□□□□□ -1.09
CSDE1-210ENST00000525878 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 LEFTY1O75610 366 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 BNIP3Q12983 259 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 RNF214Q8ND24 703 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 ISL2Q96A47 359 aa8.25□□□□□ -1.09
CSDE1-210ENST00000525878 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-210ENST00000525878 FUT4P22083 530 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 OXCT1P55809 520 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 PRKCQQ04759 706 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 EMILIN2Q9BXX0 1053 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 AKAP2Q9Y2D5 859 aa8.24□□□□□ -1.09
CSDE1-210ENST00000525878 RNGTTO60942 597 aaKnown RBP8.23□□□□□ -1.09
CSDE1-210ENST00000525878 BRD1O95696 1058 aa8.23□□□□□ -1.09
CSDE1-210ENST00000525878 CD8BP10966 210 aa8.23□□□□□ -1.09
CSDE1-210ENST00000525878 PLCL1Q15111 1095 aa8.23□□□□□ -1.09
CSDE1-210ENST00000525878 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-210ENST00000525878 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
CSDE1-210ENST00000525878 GPBAR1Q8TDU6 330 aa8.23□□□□□ -1.09
CSDE1-210ENST00000525878 BIN2Q9UBW5 565 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-210ENST00000525878 BMP6P22004 513 aa8.22□□□□□ -1.09
CSDE1-210ENST00000525878 NTF4P34130 210 aa8.22□□□□□ -1.09
CSDE1-210ENST00000525878 RING1Q06587 406 aa8.22□□□□□ -1.09
CSDE1-210ENST00000525878 PLAGL2Q9UPG8 496 aa8.22□□□□□ -1.09
CSDE1-210ENST00000525878 CARMIL2Q6F5E8 1435 aa8.21□□□□□ -1.09
CSDE1-210ENST00000525878 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
CSDE1-210ENST00000525878 ENC1O14682 589 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 CEACAM5P06731 702 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 IFI16Q16666 785 aaKnown RBP8.21□□□□□ -1.1
CSDE1-210ENST00000525878 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 FBF1Q8TES7 1133 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 ANKRD24Q8TF21 1146 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 TNKS2Q9H2K2 1166 aa8.21□□□□□ -1.1
CSDE1-210ENST00000525878 MAPK1P28482 360 aa8.2□□□□□ -1.1
CSDE1-210ENST00000525878 FZD5Q13467 585 aa8.2□□□□□ -1.1
CSDE1-210ENST00000525878 ATG4DQ86TL0 474 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-210ENST00000525878 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSDE1-210ENST00000525878 HEXIM2Q96MH2 286 aaKnown RBP8.2□□□□□ -1.1
CSDE1-210ENST00000525878 SRCIN1Q9C0H9 1055 aa8.2□□□□□ -1.1
CSDE1-210ENST00000525878 MBNL3Q9NUK0 354 aaKnown RBP8.2□□□□□ -1.1
CSDE1-210ENST00000525878 ADAMTS6Q9UKP5 1117 aa8.2□□□□□ -1.1
CSDE1-210ENST00000525878 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-210ENST00000525878 TRIM37O94972 964 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 C8AP07357 584 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 RNASE1P07998 156 aaKnown RBP8.19□□□□□ -1.1
CSDE1-210ENST00000525878 GSTT1P30711 240 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 CD96P40200 585 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 FMR1Q06787 632 aaKnown RBP eCLIP8.19□□□□□ -1.12e-19■□□□□ 8.5
CSDE1-210ENST00000525878 TOP6BLQ8N6T0 577 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 GRIN3AQ8TCU5 1115 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 OSBPL7Q9BZF2 842 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 PPM1HQ9ULR3 514 aa8.19□□□□□ -1.1
CSDE1-210ENST00000525878 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 BIN1O00499 593 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 PAGE1O75459 146 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 AOC3Q16853 763 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 SCARA3Q6AZY7 606 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 HRASLS5Q96KN8 279 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
CSDE1-210ENST00000525878 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
CSDE1-210ENST00000525878 ARID1BQ8NFD5 2236 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-210ENST00000525878 IGF2BP3O00425 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
CSDE1-210ENST00000525878 JAG1P78504 1218 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 TPTE2Q6XPS3 522 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 SNX11Q9Y5W9 270 aa8.17□□□□□ -1.1
CSDE1-210ENST00000525878 GIPC1O14908 333 aa8.16□□□□□ -1.1
CSDE1-210ENST00000525878 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
CSDE1-210ENST00000525878 ACSBG1Q96GR2 724 aa8.16□□□□□ -1.1
CSDE1-210ENST00000525878 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
CSDE1-210ENST00000525878 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
CSDE1-210ENST00000525878 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
CSDE1-210ENST00000525878 FANCGO15287 622 aa8.15□□□□□ -1.1
CSDE1-210ENST00000525878 PI4K2BQ8TCG2 481 aa8.15□□□□□ -1.1
CSDE1-210ENST00000525878 ASB16Q96NS5 453 aa8.15□□□□□ -1.1
CSDE1-210ENST00000525878 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.1
CSDE1-210ENST00000525878 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
CSDE1-210ENST00000525878 ALG1LQ6GMV1 187 aa8.14□□□□□ -1.11
CSDE1-210ENST00000525878 C12orf40Q86WS4 652 aa8.14□□□□□ -1.11
CSDE1-210ENST00000525878 LRRN4CLQ8ND94 238 aa8.14□□□□□ -1.11
CSDE1-210ENST00000525878 GTF2IRD1Q9UHL9 959 aa8.14□□□□□ -1.11
CSDE1-210ENST00000525878 CSADQ9Y600 493 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms