RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
COPB1-203ENST00000525214 HCLS1P14317 486 aaPredicted RBP9.58□□□□□ -0.88
COPB1-203ENST00000525214 HNRNPUQ00839 825 aaKnown RBP eCLIP9.58□□□□□ -0.88
COPB1-203ENST00000525214 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
COPB1-203ENST00000525214 AK5Q9Y6K8 562 aa9.58□□□□□ -0.88
COPB1-203ENST00000525214 TRIM37O94972 964 aa9.57□□□□□ -0.88
COPB1-203ENST00000525214 EIF4BP23588 611 aaKnown RBP9.57□□□□□ -0.88
COPB1-203ENST00000525214 ERVK-24P63145 666 aa9.57□□□□□ -0.88
COPB1-203ENST00000525214 PCNX4Q63HM2 1172 aa9.57□□□□□ -0.88
COPB1-203ENST00000525214 TTF2Q9UNY4 1162 aaKnown RBP9.57□□□□□ -0.88
COPB1-203ENST00000525214 SAMM50Q9Y512 469 aa9.57□□□□□ -0.88
COPB1-203ENST00000525214 NTF4P34130 210 aa9.56□□□□□ -0.88
COPB1-203ENST00000525214 CDK5R2Q13319 367 aa9.56□□□□□ -0.88
COPB1-203ENST00000525214 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
COPB1-203ENST00000525214 ACSBG1Q96GR2 724 aa9.56□□□□□ -0.88
COPB1-203ENST00000525214 RNGTTO60942 597 aaKnown RBP9.55□□□□□ -0.88
COPB1-203ENST00000525214 OGFOD3Q6PK18 319 aa9.55□□□□□ -0.88
COPB1-203ENST00000525214 SV2BQ7L1I2 683 aa9.55□□□□□ -0.88
COPB1-203ENST00000525214 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
COPB1-203ENST00000525214 ISL2Q96A47 359 aa9.55□□□□□ -0.88
COPB1-203ENST00000525214 CYP26A1O43174 497 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 PTPN11Q06124 597 aaPredicted RBP9.54□□□□□ -0.88
COPB1-203ENST00000525214 RING1Q06587 406 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 LRRC14Q15048 493 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 RNF214Q8ND24 703 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 GZF1Q9H116 711 aaPredicted RBP9.54□□□□□ -0.88
COPB1-203ENST00000525214 PARP2Q9UGN5 583 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 CYP8B1Q9UNU6 501 aa9.54□□□□□ -0.88
COPB1-203ENST00000525214 OAS3Q9Y6K5 1087 aaKnown RBP9.54□□□□□ -0.88
COPB1-203ENST00000525214 FGD1P98174 961 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 CYP27A1Q02318 531 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 SCARA3Q6AZY7 606 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 GAL3ST3Q96A11 431 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 CSADQ9Y600 493 aa9.53□□□□□ -0.88
COPB1-203ENST00000525214 DCDC2CA8MYV0 355 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 GP2P55259 537 aaKnown RBP9.52□□□□□ -0.89
COPB1-203ENST00000525214 DAB2P98082 770 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 UBE3DQ7Z6J8 389 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 C12orf40Q86WS4 652 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.89
COPB1-203ENST00000525214 ZC3H7BQ9UGR2 993 aaKnown RBP9.52□□□□□ -0.89
COPB1-203ENST00000525214 PRNPP04156 253 aa9.51□□□□□ -0.89
COPB1-203ENST00000525214 FAM87AP0C7U9 286 aa9.51□□□□□ -0.89
COPB1-203ENST00000525214 TAGLNQ01995 201 aaKnown RBP9.51□□□□□ -0.89
COPB1-203ENST00000525214 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
COPB1-203ENST00000525214 PCDHA4Q9UN74 947 aa9.51□□□□□ -0.89
COPB1-203ENST00000525214 LEFTY1O75610 366 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 WNT11O96014 354 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 INPP5AQ14642 412 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 CCDC85BQ15834 202 aaPredicted RBP9.5□□□□□ -0.89
COPB1-203ENST00000525214 TTBK2Q6IQ55 1244 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 U3KQE9 123 aa9.5□□□□□ -0.89
COPB1-203ENST00000525214 CTSHP09668 335 aa9.49□□□□□ -0.89
COPB1-203ENST00000525214 CCDC27Q2M243 656 aa9.49□□□□□ -0.89
COPB1-203ENST00000525214 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
COPB1-203ENST00000525214 LRFN4Q6PJG9 635 aa9.49□□□□□ -0.89
COPB1-203ENST00000525214 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.49□□□□□ -0.89
COPB1-203ENST00000525214 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.49□□□□□ -0.89
COPB1-203ENST00000525214 DUSP23Q9BVJ7 150 aa9.49□□□□□ -0.89
COPB1-203ENST00000525214 PSMD2Q13200 908 aa9.48□□□□□ -0.89
COPB1-203ENST00000525214 TMC4Q7Z404 712 aa9.48□□□□□ -0.89
COPB1-203ENST00000525214 KRTAP4-8Q9BYQ9 185 aa9.48□□□□□ -0.89
COPB1-203ENST00000525214 CDK8P49336 464 aa9.47□□□□□ -0.89
COPB1-203ENST00000525214 CYP27C1Q4G0S4 372 aa9.47□□□□□ -0.89
COPB1-203ENST00000525214 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
COPB1-203ENST00000525214 BSDC1Q9NW68 430 aaPredicted RBP9.47□□□□□ -0.89
COPB1-203ENST00000525214 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
COPB1-203ENST00000525214 FANCGO15287 622 aa9.46□□□□□ -0.9
COPB1-203ENST00000525214 RPS26P62854 115 aaKnown RBP9.46□□□□□ -0.9
COPB1-203ENST00000525214 VSIG10LQ86VR7 867 aa9.46□□□□□ -0.9
COPB1-203ENST00000525214 TOP6BLQ8N6T0 577 aa9.46□□□□□ -0.9
COPB1-203ENST00000525214 PLPPR2Q96GM1 343 aa9.46□□□□□ -0.9
COPB1-203ENST00000525214 LIG3P49916 1009 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
COPB1-203ENST00000525214 MAP3K11Q16584 847 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 CYFIP1Q7L576 1253 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 FAM181AQ8N9Y4 354 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 ELMO3Q96BJ8 720 aa9.45□□□□□ -0.9
COPB1-203ENST00000525214 SEPT6Q14141 434 aa9.44□□□□□ -0.9
COPB1-203ENST00000525214 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
COPB1-203ENST00000525214 PICK1Q9NRD5 415 aa9.44□□□□□ -0.9
COPB1-203ENST00000525214 ANGEL1Q9UNK9 670 aaKnown RBP9.44□□□□□ -0.9
COPB1-203ENST00000525214 USP31Q70CQ4 1352 aa9.43□□□□□ -0.9
COPB1-203ENST00000525214 ERCC3P19447 782 aa9.43□□□□□ -0.9
COPB1-203ENST00000525214 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
COPB1-203ENST00000525214 TAF1CQ15572 869 aaPredicted RBP9.43□□□□□ -0.9
COPB1-203ENST00000525214 WIPI1Q5MNZ9 446 aaPredicted RBP9.43□□□□□ -0.9
COPB1-203ENST00000525214 FAM214BQ7L5A3 538 aa9.43□□□□□ -0.9
COPB1-203ENST00000525214 PLD6Q8N2A8 252 aaKnown RBP9.43□□□□□ -0.9
COPB1-203ENST00000525214 PRAMEF27A3QJZ7 478 aa9.42□□□□□ -0.9
COPB1-203ENST00000525214 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
COPB1-203ENST00000525214 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms