RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 RPS12P25398 132 aaKnown RBP7.86□□□□□ -1.15
CD44-214ENST00000525211 CHMLP26374 656 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 EPHX2P34913 555 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 BTDP43251 543 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 DSG2Q14126 1118 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 KIF4BQ2VIQ3 1234 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 ZMYM1Q5SVZ6 1142 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 VPS53Q5VIR6 699 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 PRAMEF18Q5VWM3 479 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 NAA16Q6N069 864 aaPredicted RBP7.86□□□□□ -1.15
CD44-214ENST00000525211 LCORLQ8N3X6 602 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
CD44-214ENST00000525211 TBC1D22AQ8WUA7 517 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 EVI5LQ96CN4 794 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 GPATCH3Q96I76 525 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 FSD1Q9BTV5 496 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 ARMT1Q9H993 441 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 AATFQ9NY61 560 aaKnown RBP eCLIP7.86□□□□□ -1.15
CD44-214ENST00000525211 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
CD44-214ENST00000525211 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 TACC3Q9Y6A5 838 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 MYH2Q9UKX2 1941 aa7.86□□□□□ -1.15
CD44-214ENST00000525211 CNTNAP1P78357 1384 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 MAST3O60307 1309 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 GPR75-ASB3A0A0A6YYF3 556 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 ADM5C9JUS6 153 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 RBM5P52756 815 aaKnown RBP eCLIP7.85□□□□□ -1.15
CD44-214ENST00000525211 SH3BP5LQ7L8J4 393 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 DZIP1Q86YF9 867 aaKnown RBP7.85□□□□□ -1.15
CD44-214ENST00000525211 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 TMC2Q8TDI7 906 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 FAM163AQ96GL9 167 aaPredicted RBP7.85□□□□□ -1.15
CD44-214ENST00000525211 ZDHHC15Q96MV8 337 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 PGAP2Q9UHJ9 254 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 HACL1Q9UJ83 578 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 FZD1Q9UP38 647 aa7.85□□□□□ -1.15
CD44-214ENST00000525211 COLQQ9Y215 455 aaPredicted RBP7.85□□□□□ -1.15
CD44-214ENST00000525211 RFX7Q2KHR2 1363 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 MYO3BQ8WXR4 1341 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 TCP10L2B9ZVM9 353 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 H7C1D1 291 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 TRAF5O00463 557 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 WDHD1O75717 1129 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 MBD4O95243 580 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 SEC24BO95487 1268 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 CYP2D6P10635 497 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 MAP3K12Q12852 859 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 COL9A3Q14050 684 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 TTF1Q15361 905 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 DLGAP5Q15398 846 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 SLC4A8Q2Y0W8 1093 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 BMP2KLQ5H9B9 411 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 ANGEL2Q5VTE6 544 aaKnown RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 SPTY2D1Q68D10 685 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 HHIPL2Q6UWX4 724 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 SDR42E1Q8WUS8 393 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 STRBPQ96SI9 672 aaKnown RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 MRIQ9BWK5 157 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 EPB41L4AQ9HCS5 686 aaPredicted RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 ADARB2Q9NS39 739 aaKnown RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 USP40Q9NVE5 1235 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 GGA3Q9NZ52 723 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 SERPINA10Q9UK55 444 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 TAF6LQ9Y6J9 622 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 POLR2AP24928 1970 aaKnown RBP7.84□□□□□ -1.15
CD44-214ENST00000525211 MAST2Q6P0Q8 1798 aa7.84□□□□□ -1.15
CD44-214ENST00000525211 CYP2D7A0A087X1C5 515 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 MAGEB6P1A0A0J9YX57 407 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 C2orf72A6NCS6 295 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 VEGFAP15692 232 aaPredicted RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 PPP4CP60510 307 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 FOXK1P85037 733 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 HDLBPQ00341 1268 aaKnown RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 PTH1RQ03431 593 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 UBE3CQ15386 1083 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 SHROOM1Q2M3G4 852 aaPredicted RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 CWC27Q6UX04 472 aaKnown RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 MAPKAPK5Q8IW41 473 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 CNTROBQ8N137 903 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 ZGPATQ8N5A5 531 aaKnown RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 APPBP2Q92624 585 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 GLIS2Q9BZE0 524 aaPredicted RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 EMILIN3Q9NT22 766 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 SAP30BPQ9UHR5 308 aaKnown RBP7.83□□□□□ -1.16
CD44-214ENST00000525211 MYH7P12883 1935 aa7.83□□□□□ -1.16
CD44-214ENST00000525211 SSC5DA1L4H1 1573 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 POTEFA5A3E0 1075 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 DDTLA6NHG4 134 aaPredicted RBP7.82□□□□□ -1.16
CD44-214ENST00000525211 FAM196BA6NMK8 535 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 GPAA1O43292 621 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 LMOD1P29536 600 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms