RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 OTUD7BQ6GQQ9 843 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 ATG9AQ7Z3C6 839 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 CLMNQ96JQ2 1002 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 ZDHHC15Q96MV8 337 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 MRIQ9BWK5 157 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-242ENST00000524292 GPR25O00155 361 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 USP2O75604 605 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 MLLT1Q03111 559 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 GRIK5Q16478 980 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 FKBP1CQ5VVH2 108 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 MEIS3Q99687 375 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 TMEM39BQ9GZU3 492 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 CSADQ9Y600 493 aa10.55□□□□□ -0.72
CTNNA1-242ENST00000524292 SEMA3EO15041 775 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 FKTNO75072 461 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 PBX2P40425 430 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 FAM83AQ86UY5 434 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 TEPSINQ96N21 525 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 ELP3Q9H9T3 547 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 COPRSQ9NQ92 184 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 DENND2AQ9ULE3 1009 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
CTNNA1-242ENST00000524292 SRGAP3O43295 1099 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 RGS19P49795 217 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 FOSBP53539 338 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 CACNB3P54284 484 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 VGLL4Q14135 290 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 DCAF15Q66K64 600 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 APOBEC3HQ6NTF7 200 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 ATF7IPQ6VMQ6 1270 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 AKAP2Q9Y2D5 859 aa10.53□□□□□ -0.72
CTNNA1-242ENST00000524292 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-242ENST00000524292 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 IGF2BP3O00425 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 GNAI2P04899 355 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 TRIM27P14373 513 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 PHKA1P46020 1223 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 GTF2A2P52657 109 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 MTX1Q13505 466 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 HPS5Q9UPZ3 1129 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 SALL1Q9NSC2 1324 aa10.52□□□□□ -0.73
CTNNA1-242ENST00000524292 WDHD1O75717 1129 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 PRDX5P30044 214 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 GJA5P36382 358 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 HNRNPUQ00839 825 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 DZIP1Q86YF9 867 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 DAGLAQ9Y4D2 1042 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 OTOFQ9HC10 1997 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 LAMB1P07942 1786 aa10.51□□□□□ -0.73
CTNNA1-242ENST00000524292 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 BCAR3O75815 825 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 ADORA1P30542 326 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 SOX10P56693 466 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 CRHR2Q13324 411 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 ZKSCAN2Q63HK3 967 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 SPTY2D1Q68D10 685 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 FTSJ3Q8IY81 847 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 FAM151AQ8WW52 585 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 R3HDMLQ9H3Y0 253 aa10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 PDS5AQ29RF7 1337 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-242ENST00000524292 CCL15-CCL14A0A0B4J2E2 113 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 A0A1B0GUL7 405 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 CETPP11597 493 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 TIMM10P62072 90 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 TCP10Q12799 353 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 TFCP2Q12800 502 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 G3BP1Q13283 466 aaKnown RBP eCLIP10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 RASGRF1Q13972 1273 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 CCL15Q16663 113 aa10.49□□□□□ -0.73
CTNNA1-242ENST00000524292 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms