RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 RPS26P62854 115 aaKnown RBP7.78□□□□□ -1.16
PCM1-219ENST00000523540 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
PCM1-219ENST00000523540 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
PCM1-219ENST00000523540 CYP8B1Q9UNU6 501 aa7.78□□□□□ -1.16
PCM1-219ENST00000523540 E9PSI1 815 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 SCAMP3O14828 347 aaKnown RBP7.77□□□□□ -1.17
PCM1-219ENST00000523540 JAG1P78504 1218 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 FANCCQ00597 558 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 LRRC14Q15048 493 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 GRIN3AQ8TCU5 1115 aa7.77□□□□□ -1.17
PCM1-219ENST00000523540 METTL5Q9NRN9 209 aaKnown RBP7.77□□□□□ -1.17
PCM1-219ENST00000523540 TRIM37O94972 964 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 ADH5P11766 374 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 PREPP48147 710 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 LIG3P49916 1009 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
PCM1-219ENST00000523540 TTBK2Q6IQ55 1244 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 ERMP1Q7Z2K6 904 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 EZH1Q92800 747 aaPredicted RBP7.76□□□□□ -1.17
PCM1-219ENST00000523540 RSRP1Q9BUV0 290 aa7.76□□□□□ -1.17
PCM1-219ENST00000523540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.75□□□□□ -1.17
PCM1-219ENST00000523540 SART1O43290 800 aaKnown RBP7.75□□□□□ -1.17
PCM1-219ENST00000523540 ZNF76P36508 570 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 MAP3K11Q16584 847 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 YIPF2Q9BWQ6 316 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
PCM1-219ENST00000523540 CCDC86Q9H6F5 360 aaKnown RBP7.75□□□□□ -1.17
PCM1-219ENST00000523540 PCDHGC5Q9Y5F6 944 aa7.75□□□□□ -1.17
PCM1-219ENST00000523540 ZNF862O60290 1169 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 BMP3P12645 472 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 HOXA10P31260 410 aaPredicted RBP7.74□□□□□ -1.17
PCM1-219ENST00000523540 MPRIPQ6WCQ1 1025 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 BEND4Q6ZU67 534 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
PCM1-219ENST00000523540 ABI1Q8IZP0 508 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 C2CD4AQ8NCU7 369 aaPredicted RBP7.74□□□□□ -1.17
PCM1-219ENST00000523540 PHC3Q8NDX5 983 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 RNF34Q969K3 372 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
PCM1-219ENST00000523540 AOC2O75106 756 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 SLFN14P0C7P3 912 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 TFE3P19532 575 aaPredicted RBP7.73□□□□□ -1.17
PCM1-219ENST00000523540 HDLBPQ00341 1268 aaKnown RBP7.73□□□□□ -1.17
PCM1-219ENST00000523540 CPSF6Q16630 551 aaKnown RBP eCLIP7.73□□□□□ -1.17
PCM1-219ENST00000523540 MAP1SQ66K74 1059 aaPredicted RBP7.73□□□□□ -1.17
PCM1-219ENST00000523540 LLGL2Q6P1M3 1020 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 KCNB2Q92953 911 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 WDR89Q96FK6 387 aaPredicted RBP7.73□□□□□ -1.17
PCM1-219ENST00000523540 GGT7Q9UJ14 662 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 TLR6Q9Y2C9 796 aa7.73□□□□□ -1.17
PCM1-219ENST00000523540 F6X3S4 739 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 GAS2O43903 313 aaKnown RBP7.72□□□□□ -1.17
PCM1-219ENST00000523540 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 MSMPQ1L6U9 139 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 OGFOD2Q6N063 350 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 NFXL1Q6ZNB6 911 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 CBLL1Q75N03 491 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 ATXN3LQ9H3M9 355 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
PCM1-219ENST00000523540 WDR64B1ANS9 1081 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 LIG1P18858 919 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 ERVK-24P63145 666 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 ID3Q02535 119 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 PWP1Q13610 501 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 CCDC84Q86UT8 332 aaPredicted RBP7.71□□□□□ -1.18
PCM1-219ENST00000523540 C12orf50Q8NA57 414 aaPredicted RBP7.71□□□□□ -1.18
PCM1-219ENST00000523540 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 GAL3ST3Q96A11 431 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 RHOVQ96L33 236 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
PCM1-219ENST00000523540 TCF3P15923 654 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
PCM1-219ENST00000523540 PTPN11Q06124 597 aaPredicted RBP7.7□□□□□ -1.18
PCM1-219ENST00000523540 C9orf131Q5VYM1 1079 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 NPM2Q86SE8 214 aaKnown RBP7.7□□□□□ -1.18
PCM1-219ENST00000523540 KCNF1Q9H3M0 494 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 ACSS3Q9H6R3 686 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 RAD18Q9NS91 495 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
PCM1-219ENST00000523540 PF4P02776 101 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 PRNPP04156 253 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 LMNB2Q03252 620 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 CAMK2GQ13555 558 aaPredicted RBP7.69□□□□□ -1.18
PCM1-219ENST00000523540 MAP7Q14244 749 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 ZC3H12AQ5D1E8 599 aaKnown RBP7.69□□□□□ -1.18
PCM1-219ENST00000523540 POU5F2Q8N7G0 328 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 ACTL7BQ9Y614 415 aa7.69□□□□□ -1.18
PCM1-219ENST00000523540 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 DRD2P14416 443 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms