RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SALL1Q9NSC2 1324 aa32.23■■■□□ 2.75
PVT1-219ENST00000523427 PHF20L1A8MW92 1017 aa32.22■■■□□ 2.75
PVT1-219ENST00000523427 IL15P40933 162 aaPredicted RBP32.22■■■□□ 2.75
PVT1-219ENST00000523427 UBXN2AP68543 259 aa32.22■■■□□ 2.75
PVT1-219ENST00000523427 CCDC102BQ68D86 513 aa32.22■■■□□ 2.75
PVT1-219ENST00000523427 NOB1Q9ULX3 412 aaKnown RBP32.22■■■□□ 2.75
PVT1-219ENST00000523427 SEMA3EO15041 775 aa32.21■■■□□ 2.75
PVT1-219ENST00000523427 GJB1P08034 283 aa32.21■■■□□ 2.75
PVT1-219ENST00000523427 PTPRAP18433 802 aa32.21■■■□□ 2.75
PVT1-219ENST00000523427 SH3BP5LQ7L8J4 393 aa32.21■■■□□ 2.75
PVT1-219ENST00000523427 FASTKD5Q7L8L6 764 aaKnown RBP32.21■■■□□ 2.75
PVT1-219ENST00000523427 ENTPD3O75355 529 aa32.2■■■□□ 2.75
PVT1-219ENST00000523427 GJA8P48165 433 aa32.2■■■□□ 2.75
PVT1-219ENST00000523427 TIMM10P62072 90 aa32.2■■■□□ 2.75
PVT1-219ENST00000523427 ZGPATQ8N5A5 531 aaKnown RBP32.2■■■□□ 2.75
PVT1-219ENST00000523427 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.2■■■□□ 2.75
PVT1-219ENST00000523427 A0A0G2JLL6 359 aaPredicted RBP32.19■■■□□ 2.74
PVT1-219ENST00000523427 DDTLA6NHG4 134 aaPredicted RBP32.19■■■□□ 2.74
PVT1-219ENST00000523427 PRRT2Q7Z6L0 340 aaPredicted RBP32.19■■■□□ 2.74
PVT1-219ENST00000523427 CCDC84Q86UT8 332 aaPredicted RBP32.19■■■□□ 2.74
PVT1-219ENST00000523427 IDI2Q9BXS1 227 aa32.19■■■□□ 2.74
PVT1-219ENST00000523427 TAOK2Q9UL54 1235 aa32.19■■■□□ 2.74
PVT1-219ENST00000523427 ATRNL1Q5VV63 1379 aa32.19■■■□□ 2.74
PVT1-219ENST00000523427 TRIM75PA6NK02 468 aa32.18■■■□□ 2.74
PVT1-219ENST00000523427 RASGRF1Q13972 1273 aa32.18■■■□□ 2.74
PVT1-219ENST00000523427 UNC93B1Q9H1C4 597 aa32.18■■■□□ 2.74
PVT1-219ENST00000523427 DDX4Q9NQI0 724 aaKnown RBP32.18■■■□□ 2.74
PVT1-219ENST00000523427 AFG3L2Q9Y4W6 797 aa32.18■■■□□ 2.74
PVT1-219ENST00000523427 ELNP15502 786 aa32.17■■■□□ 2.74
PVT1-219ENST00000523427 BTDP43251 543 aa32.17■■■□□ 2.74
PVT1-219ENST00000523427 SMCR8Q8TEV9 937 aaPredicted RBP32.17■■■□□ 2.74
PVT1-219ENST00000523427 GAKO14976 1311 aa32.17■■■□□ 2.74
PVT1-219ENST00000523427 ADCY3O60266 1144 aa32.16■■■□□ 2.74
PVT1-219ENST00000523427 SLAIN1Q8ND83 568 aa32.16■■■□□ 2.74
PVT1-219ENST00000523427 U2AF1L4Q8WU68 220 aaKnown RBP32.16■■■□□ 2.74
PVT1-219ENST00000523427 HTATIP2Q9BUP3 242 aa32.16■■■□□ 2.74
PVT1-219ENST00000523427 RBM27Q9P2N5 1060 aaKnown RBP32.16■■■□□ 2.74
PVT1-219ENST00000523427 FLT3LGP49771 235 aa32.15■■■□□ 2.74
PVT1-219ENST00000523427 SLF2Q8IX21 1173 aa32.15■■■□□ 2.74
PVT1-219ENST00000523427 MEIS3Q99687 375 aa32.15■■■□□ 2.74
PVT1-219ENST00000523427 MYH2Q9UKX2 1941 aa32.15■■■□□ 2.74
PVT1-219ENST00000523427 TNPO2O14787 897 aaKnown RBP32.14■■■□□ 2.74
PVT1-219ENST00000523427 FARP2O94887 1054 aaPredicted RBP32.14■■■□□ 2.74
PVT1-219ENST00000523427 COPRSQ9NQ92 184 aa32.14■■■□□ 2.74
PVT1-219ENST00000523427 HDAC5Q9UQL6 1122 aa32.14■■■□□ 2.74
PVT1-219ENST00000523427 FAM196BA6NMK8 535 aa32.13■■■□□ 2.73
PVT1-219ENST00000523427 CTNND1O60716 968 aaKnown RBP32.13■■■□□ 2.73
PVT1-219ENST00000523427 SPTY2D1Q68D10 685 aaPredicted RBP32.13■■■□□ 2.73
PVT1-219ENST00000523427 API5Q9BZZ5 524 aaKnown RBP32.13■■■□□ 2.73
PVT1-219ENST00000523427 DOCK2Q92608 1830 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 A0A1B0GUL7 405 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 TFCP2Q12800 502 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 UBE2Q1Q7Z7E8 422 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 XAGE2Q96GT9 111 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 NEUROD6Q96NK8 337 aa32.12■■■□□ 2.73
PVT1-219ENST00000523427 INHAP05111 366 aa32.11■■■□□ 2.73
PVT1-219ENST00000523427 ERICH6Q7L0X2 663 aa32.11■■■□□ 2.73
PVT1-219ENST00000523427 ANKRD13CQ8N6S4 541 aa32.11■■■□□ 2.73
PVT1-219ENST00000523427 RFX7Q2KHR2 1363 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 MROH7-TTC4A0A0A0MT08 1334 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 SGPL1O95470 568 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 TFRCP02786 760 aaKnown RBP32.1■■■□□ 2.73
PVT1-219ENST00000523427 MAP3K10Q02779 954 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 MECOMQ03112 1051 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 NR2E3Q9Y5X4 410 aa32.1■■■□□ 2.73
PVT1-219ENST00000523427 FAM163AQ96GL9 167 aaPredicted RBP32.09■■■□□ 2.73
PVT1-219ENST00000523427 DEFB118Q96PH6 123 aa32.09■■■□□ 2.73
PVT1-219ENST00000523427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.09■■■□□ 2.733e-9■■■■□ 25.5
PVT1-219ENST00000523427 MGAMO43451 1857 aa32.08■■■□□ 2.73
PVT1-219ENST00000523427 SRGAP3O43295 1099 aa32.08■■■□□ 2.73
PVT1-219ENST00000523427 TREML2Q5T2D2 321 aa32.08■■■□□ 2.73
PVT1-219ENST00000523427 AKAP2Q9Y2D5 859 aa32.08■■■□□ 2.73
PVT1-219ENST00000523427 SLC45A1Q9Y2W3 748 aa32.08■■■□□ 2.73
PVT1-219ENST00000523427 MVPQ14764 893 aaKnown RBP32.07■■■□□ 2.72
PVT1-219ENST00000523427 TBC1D9Q6ZT07 1266 aa32.07■■■□□ 2.72
PVT1-219ENST00000523427 AGTPBP1Q9UPW5 1226 aa32.07■■■□□ 2.72
PVT1-219ENST00000523427 RHBDL3P58872 404 aa32.06■■■□□ 2.72
PVT1-219ENST00000523427 GORABQ5T7V8 394 aa32.06■■■□□ 2.72
PVT1-219ENST00000523427 PI16Q6UXB8 463 aa32.06■■■□□ 2.72
PVT1-219ENST00000523427 COA7Q96BR5 231 aa32.06■■■□□ 2.72
PVT1-219ENST00000523427 GPR75-ASB3A0A0A6YYF3 556 aa32.05■■■□□ 2.72
PVT1-219ENST00000523427 SPP2Q13103 211 aa32.05■■■□□ 2.72
PVT1-219ENST00000523427 ZNF384Q8TF68 577 aa32.05■■■□□ 2.72
PVT1-219ENST00000523427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.05■■■□□ 2.72
PVT1-219ENST00000523427 TRMT2AQ8IZ69 625 aaKnown RBP32.04■■■□□ 2.72
PVT1-219ENST00000523427 PXYLP1Q8TE99 480 aa32.04■■■□□ 2.72
PVT1-219ENST00000523427 RAI14Q9P0K7 980 aa32.04■■■□□ 2.72
PVT1-219ENST00000523427 HMG20BQ9P0W2 317 aa32.04■■■□□ 2.72
PVT1-219ENST00000523427 PDS5AQ29RF7 1337 aaKnown RBP32.03■■■□□ 2.72
PVT1-219ENST00000523427 ZBTB7BO15156 539 aaPredicted RBP32.03■■■□□ 2.72
PVT1-219ENST00000523427 EVI5O60447 810 aa32.03■■■□□ 2.72
PVT1-219ENST00000523427 PNMA3Q9UL41 463 aa32.03■■■□□ 2.72
PVT1-219ENST00000523427 DOCK1Q14185 1865 aa32.03■■■□□ 2.72
PVT1-219ENST00000523427 IRF5Q13568 498 aa32.02■■■□□ 2.72
PVT1-219ENST00000523427 LDHCP07864 332 aa32.01■■■□□ 2.71
PVT1-219ENST00000523427 SPATA5Q8NB90 893 aa32.01■■■□□ 2.71
PVT1-219ENST00000523427 ZBTB22O15209 634 aa32■■■□□ 2.71
PVT1-219ENST00000523427 TBC1D12O60347 775 aa32■■■□□ 2.71
PVT1-219ENST00000523427 GNAI3P08754 354 aa32■■■□□ 2.71
PVT1-219ENST00000523427 CT47B1P0C2W7 299 aaPredicted RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms