RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 ZKSCAN3Q9BRR0 538 aa8.53□□□□□ -1.04
LINC00534-203ENST00000523406 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
LINC00534-203ENST00000523406 ARHGEF28Q8N1W1 1705 aaKnown RBP8.53□□□□□ -1.04
LINC00534-203ENST00000523406 ADAMTS2O95450 1211 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 EIF4BP23588 611 aaKnown RBP8.52□□□□□ -1.05
LINC00534-203ENST00000523406 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
LINC00534-203ENST00000523406 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
LINC00534-203ENST00000523406 NXPE4Q6UWF7 544 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 ACDQ96AP0 544 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 TCF12Q99081 682 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 SRCIN1Q9C0H9 1055 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 EHD4Q9H223 541 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 IGSF5Q9NSI5 407 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 SUPT16HQ9Y5B9 1047 aaKnown RBP8.52□□□□□ -1.05
LINC00534-203ENST00000523406 DLC1Q96QB1 1528 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 TULP4Q9NRJ4 1543 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 MYOM1P52179 1685 aa8.52□□□□□ -1.05
LINC00534-203ENST00000523406 INSRP06213 1382 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 CTSHP09668 335 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 C1orf229Q6ZS94 237 aaPredicted RBP8.51□□□□□ -1.05
LINC00534-203ENST00000523406 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
LINC00534-203ENST00000523406 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 BACH2Q9BYV9 841 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 VTI1BQ9UEU0 232 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 ADAMTS8Q9UP79 889 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
LINC00534-203ENST00000523406 NSD2O96028 1365 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 TRPA1O75762 1119 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 WFS1O76024 890 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 GHRHP01286 108 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 EPXP11678 715 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 CPB1P15086 417 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 GMPRP36959 345 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 ATP11AP98196 1134 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 FAM135BQ49AJ0 1406 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 PERM1Q5SV97 790 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 UBR1Q8IWV7 1749 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 TMEM102Q8N9M5 508 aaPredicted RBP8.5□□□□□ -1.05
LINC00534-203ENST00000523406 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 BHLHE41Q9C0J9 482 aaPredicted RBP8.5□□□□□ -1.05
LINC00534-203ENST00000523406 RASSF4Q9H2L5 321 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 LIN7BQ9HAP6 207 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 FRRS1LQ9P0K9 344 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 FAM8A1Q9UBU6 413 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 NUDCQ9Y266 331 aa8.5□□□□□ -1.05
LINC00534-203ENST00000523406 C3P01024 1663 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 SMG6Q86US8 1419 aaKnown RBP8.49□□□□□ -1.05
LINC00534-203ENST00000523406 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
LINC00534-203ENST00000523406 ANKLE2Q86XL3 938 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 NXPE3Q969Y0 559 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 LPIN3Q9BQK8 851 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 ABCB6Q9NP58 842 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 STARD13Q9Y3M8 1113 aa8.49□□□□□ -1.05
LINC00534-203ENST00000523406 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 ADAMTS13Q76LX8 1427 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 TSNAXIP1Q2TAA8 658 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
LINC00534-203ENST00000523406 PLD4Q96BZ4 506 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 CRELD1Q96HD1 420 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 SLIT1O75093 1534 aa8.48□□□□□ -1.05
LINC00534-203ENST00000523406 TECPR2O15040 1411 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 ARHGAP23Q9P227 1491 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 PDE2AO00408 941 aaPredicted RBP8.47□□□□□ -1.05
LINC00534-203ENST00000523406 USP17L7P0C7H9 530 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 ALAS2P22557 587 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 MTHFSP49914 203 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 ELMSAN1Q6PJG2 1045 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00534-203ENST00000523406 C3orf58Q8NDZ4 430 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 TTC9Q92623 222 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 POP1Q99575 1024 aaKnown RBP8.47□□□□□ -1.05
LINC00534-203ENST00000523406 SMG9Q9H0W8 520 aaKnown RBP8.47□□□□□ -1.05
LINC00534-203ENST00000523406 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
LINC00534-203ENST00000523406 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
LINC00534-203ENST00000523406 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.05
LINC00534-203ENST00000523406 OIP5O43482 229 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00534-203ENST00000523406 GRIA4P48058 902 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 CEP135Q66GS9 1140 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 PSAPL1Q6NUJ1 521 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 ADAMTSL4Q6UY14 1074 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 C20orf204Q6ZNR8 217 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 EDARADDQ8WWZ3 215 aa8.46□□□□□ -1.06
LINC00534-203ENST00000523406 RIMS1Q86UR5 1692 aaKnown RBP8.46□□□□□ -1.06
LINC00534-203ENST00000523406 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms