RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GABRQQ9UN88 632 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 ZHX2Q9Y6X8 837 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 DOCK1Q14185 1865 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 ENTPD3O75355 529 aa28.33■■■□□ 2.13
PVT1-218ENST00000523328 PTPRAP18433 802 aa28.33■■■□□ 2.13
PVT1-218ENST00000523328 SH3BP5LQ7L8J4 393 aa28.33■■■□□ 2.13
PVT1-218ENST00000523328 RBM27Q9P2N5 1060 aaKnown RBP28.33■■■□□ 2.13
PVT1-218ENST00000523328 BIN2Q9UBW5 565 aaPredicted RBP28.33■■■□□ 2.13
PVT1-218ENST00000523328 GAKO14976 1311 aa28.33■■■□□ 2.13
PVT1-218ENST00000523328 UBXN2AP68543 259 aa28.32■■■□□ 2.12
PVT1-218ENST00000523328 MAP3K10Q02779 954 aa28.32■■■□□ 2.12
PVT1-218ENST00000523328 ALDH1L2Q3SY69 923 aa28.32■■■□□ 2.12
PVT1-218ENST00000523328 FASTKD5Q7L8L6 764 aaKnown RBP28.32■■■□□ 2.12
PVT1-218ENST00000523328 SLAIN1Q8ND83 568 aa28.32■■■□□ 2.12
PVT1-218ENST00000523328 AFG3L2Q9Y4W6 797 aa28.32■■■□□ 2.12
PVT1-218ENST00000523328 UBTFL1P0CB47 393 aaPredicted RBP28.31■■■□□ 2.12
PVT1-218ENST00000523328 SLFN5Q08AF3 891 aa28.31■■■□□ 2.12
PVT1-218ENST00000523328 DOCK3Q8IZD9 2030 aa28.31■■■□□ 2.12
PVT1-218ENST00000523328 SLURP2P0DP57 97 aa28.3■■■□□ 2.12
PVT1-218ENST00000523328 IL15P40933 162 aaPredicted RBP28.3■■■□□ 2.12
PVT1-218ENST00000523328 U2AF1L4Q8WU68 220 aaKnown RBP28.3■■■□□ 2.12
PVT1-218ENST00000523328 HTATIP2Q9BUP3 242 aa28.3■■■□□ 2.12
PVT1-218ENST00000523328 UNC93B1Q9H1C4 597 aa28.3■■■□□ 2.12
PVT1-218ENST00000523328 PICK1Q9NRD5 415 aa28.3■■■□□ 2.12
PVT1-218ENST00000523328 ZNF316A6NFI3 1004 aaPredicted RBP28.29■■■□□ 2.12
PVT1-218ENST00000523328 DDTLA6NHG4 134 aaPredicted RBP28.29■■■□□ 2.12
PVT1-218ENST00000523328 ADORA1P30542 326 aa28.29■■■□□ 2.12
PVT1-218ENST00000523328 CCDC102BQ68D86 513 aa28.29■■■□□ 2.12
PVT1-218ENST00000523328 ZGPATQ8N5A5 531 aaKnown RBP28.29■■■□□ 2.12
PVT1-218ENST00000523328 PRO3102Q9H379 93 aa28.29■■■□□ 2.12
PVT1-218ENST00000523328 PA2G4Q9UQ80 394 aaKnown RBP28.29■■■□□ 2.12
PVT1-218ENST00000523328 SLC45A1Q9Y2W3 748 aa28.29■■■□□ 2.12
PVT1-218ENST00000523328 GADL1Q6ZQY3 521 aa28.28■■■□□ 2.12
PVT1-218ENST00000523328 DDX4Q9NQI0 724 aaKnown RBP28.28■■■□□ 2.12
PVT1-218ENST00000523328 SMC4Q9NTJ3 1288 aa28.28■■■□□ 2.12
PVT1-218ENST00000523328 FLT3LGP49771 235 aa28.27■■■□□ 2.12
PVT1-218ENST00000523328 RASGRF1Q13972 1273 aa28.27■■■□□ 2.12
PVT1-218ENST00000523328 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
PVT1-218ENST00000523328 ADCY3O60266 1144 aa28.26■■■□□ 2.11
PVT1-218ENST00000523328 CTNND1O60716 968 aaKnown RBP28.26■■■□□ 2.11
PVT1-218ENST00000523328 FARP2O94887 1054 aaPredicted RBP28.26■■■□□ 2.11
PVT1-218ENST00000523328 SGPL1O95470 568 aa28.26■■■□□ 2.11
PVT1-218ENST00000523328 ZSCAN29Q8IWY8 852 aaPredicted RBP28.26■■■□□ 2.11
PVT1-218ENST00000523328 COPRSQ9NQ92 184 aa28.26■■■□□ 2.11
PVT1-218ENST00000523328 LRRFIP2Q9Y608 721 aaKnown RBP28.26■■■□□ 2.11
PVT1-218ENST00000523328 PDS5AQ29RF7 1337 aaKnown RBP28.25■■■□□ 2.11
PVT1-218ENST00000523328 DZIP1Q86YF9 867 aaKnown RBP28.25■■■□□ 2.11
PVT1-218ENST00000523328 PXYLP1Q8TE99 480 aa28.25■■■□□ 2.11
PVT1-218ENST00000523328 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.25■■■□□ 2.11
PVT1-218ENST00000523328 ELNP15502 786 aa28.24■■■□□ 2.11
PVT1-218ENST00000523328 ABCF2Q9UG63 623 aa28.24■■■□□ 2.11
PVT1-218ENST00000523328 TRIM75PA6NK02 468 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 TNPO2O14787 897 aaKnown RBP28.23■■■□□ 2.11
PVT1-218ENST00000523328 INHAP05111 366 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 BTDP43251 543 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 TIMM10P62072 90 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 IRF5Q13568 498 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 SLF2Q8IX21 1173 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 SMCR8Q8TEV9 937 aaPredicted RBP28.23■■■□□ 2.11
PVT1-218ENST00000523328 CDCA7LQ96GN5 454 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 NR2E3Q9Y5X4 410 aa28.23■■■□□ 2.11
PVT1-218ENST00000523328 ZBTB7BO15156 539 aaPredicted RBP28.22■■■□□ 2.11
PVT1-218ENST00000523328 PICALMQ13492 652 aa28.22■■■□□ 2.11
PVT1-218ENST00000523328 CCDC84Q86UT8 332 aaPredicted RBP28.22■■■□□ 2.11
PVT1-218ENST00000523328 MROH7-TTC4A0A0A0MT08 1334 aa28.21■■■□□ 2.11
PVT1-218ENST00000523328 RHBDL3P58872 404 aa28.21■■■□□ 2.11
PVT1-218ENST00000523328 NOB1Q9ULX3 412 aaKnown RBP28.21■■■□□ 2.11
PVT1-218ENST00000523328 AGTPBP1Q9UPW5 1226 aa28.21■■■□□ 2.11
PVT1-218ENST00000523328 ALPK3Q96L96 1907 aa28.21■■■□□ 2.11
PVT1-218ENST00000523328 ATAD5Q96QE3 1844 aa28.2■■■□□ 2.11
PVT1-218ENST00000523328 LOC285556D6RIA3 1793 aa28.2■■■□□ 2.11
PVT1-218ENST00000523328 SPTY2D1Q68D10 685 aaPredicted RBP28.2■■■□□ 2.1
PVT1-218ENST00000523328 ZNF384Q8TF68 577 aa28.2■■■□□ 2.1
PVT1-218ENST00000523328 PAK6Q9NQU5 681 aaPredicted RBP28.2■■■□□ 2.1
PVT1-218ENST00000523328 HDAC5Q9UQL6 1122 aa28.2■■■□□ 2.1
PVT1-218ENST00000523328 GPR75-ASB3A0A0A6YYF3 556 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 TBC1D12O60347 775 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 MECOMQ03112 1051 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 TREML2Q5T2D2 321 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 TRMT2AQ8IZ69 625 aaKnown RBP28.19■■■□□ 2.1
PVT1-218ENST00000523328 ANKRD13CQ8N6S4 541 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 DEFB118Q96PH6 123 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 MEIS3Q99687 375 aa28.19■■■□□ 2.1
PVT1-218ENST00000523328 A0A1B0GUL7 405 aa28.18■■■□□ 2.1
PVT1-218ENST00000523328 NPM3O75607 178 aaKnown RBP28.18■■■□□ 2.1
PVT1-218ENST00000523328 CAPN2P17655 700 aa28.18■■■□□ 2.1
PVT1-218ENST00000523328 XAGE2Q96GT9 111 aa28.18■■■□□ 2.1
PVT1-218ENST00000523328 FAM110CQ1W6H9 321 aa28.17■■■□□ 2.1
PVT1-218ENST00000523328 API5Q9BZZ5 524 aaKnown RBP28.17■■■□□ 2.1
PVT1-218ENST00000523328 FAM196BA6NMK8 535 aa28.16■■■□□ 2.1
PVT1-218ENST00000523328 TFRCP02786 760 aaKnown RBP28.16■■■□□ 2.1
PVT1-218ENST00000523328 ERICH6Q7L0X2 663 aa28.16■■■□□ 2.1
PVT1-218ENST00000523328 PROCA1Q8NCQ7 364 aaPredicted RBP28.16■■■□□ 2.1
PVT1-218ENST00000523328 COA7Q96BR5 231 aa28.16■■■□□ 2.1
PVT1-218ENST00000523328 CRISPLD2Q9H0B8 497 aa28.16■■■□□ 2.1
PVT1-218ENST00000523328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.16■■■□□ 2.1
PVT1-218ENST00000523328 EVI5O60447 810 aa28.15■■■□□ 2.1
PVT1-218ENST00000523328 TFCP2Q12800 502 aa28.15■■■□□ 2.1
PVT1-218ENST00000523328 MVPQ14764 893 aaKnown RBP28.15■■■□□ 2.1
PVT1-218ENST00000523328 OSBPL5Q9H0X9 879 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms