RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SCYL3Q8IZE3 742 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
SDC2-207ENST00000522911 AKAP2Q9Y2D5 859 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 GNAI3P08754 354 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 PTPRAP18433 802 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 CTGFP29279 349 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 PSMC4P43686 418 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 TCP10Q12799 353 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 SIL1Q9H173 461 aa11.66□□□□□ -0.54
SDC2-207ENST00000522911 LRRFIP2Q9Y608 721 aaKnown RBP11.66□□□□□ -0.54
SDC2-207ENST00000522911 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 GJB1P08034 283 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 OSBPP22059 807 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 GRK4P32298 578 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 GJA8P48165 433 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 RGS3P49796 1198 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 RARSP54136 660 aaKnown RBP11.65□□□□□ -0.54
SDC2-207ENST00000522911 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
SDC2-207ENST00000522911 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 SH3TC2Q8TF17 1288 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 MEIS3Q99687 375 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 PICK1Q9NRD5 415 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 CPA4Q9UI42 421 aa11.65□□□□□ -0.54
SDC2-207ENST00000522911 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 ADORA1P30542 326 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
SDC2-207ENST00000522911 FCGRTP55899 365 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 RHBDL3P58872 404 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 IRF5Q13568 498 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 DZIP1Q86YF9 867 aaKnown RBP11.64□□□□□ -0.55
SDC2-207ENST00000522911 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 PA2G4Q9UQ80 394 aaKnown RBP11.64□□□□□ -0.55
SDC2-207ENST00000522911 ZHX2Q9Y6X8 837 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 DOCK2Q92608 1830 aa11.64□□□□□ -0.55
SDC2-207ENST00000522911 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 TIMM10P62072 90 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 RAET1EQ8TD07 263 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 ZNF384Q8TF68 577 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 XAGE2Q96GT9 111 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 OSBPL5Q9H0X9 879 aaPredicted RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
SDC2-207ENST00000522911 CEP290O15078 2479 aa11.63□□□□□ -0.55
SDC2-207ENST00000522911 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 LAMA3Q16787 3333 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 LDHCP07864 332 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 BTDP43251 543 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 UBXN2AP68543 259 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 GSTO1P78417 241 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 MECOMQ03112 1051 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 MTFR1Q15390 333 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
SDC2-207ENST00000522911 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 AGTPBP1Q9UPW5 1226 aa11.62□□□□□ -0.55
SDC2-207ENST00000522911 PTPRFP10586 1907 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 IPO8O15397 1037 aaKnown RBP11.61□□□□□ -0.55
SDC2-207ENST00000522911 CYP2C8P10632 490 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 CCL5P13501 91 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 PRKCZQ05513 592 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 TFCP2Q12800 502 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 METTL16Q86W50 562 aaKnown RBP11.61□□□□□ -0.55
SDC2-207ENST00000522911 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 HMG20BQ9P0W2 317 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 ABCF2Q9UG63 623 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
SDC2-207ENST00000522911 DOCK1Q14185 1865 aa11.61□□□□□ -0.55
SDC2-207ENST00000522911 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 SH3D19Q5HYK7 790 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
SDC2-207ENST00000522911 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 HTATIP2Q9BUP3 242 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
SDC2-207ENST00000522911 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
SDC2-207ENST00000522911 AK9Q5TCS8 1911 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 A0A1W2PPC1 479 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 H0YGN5 161 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 ADCY3O60266 1144 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 SGPL1O95470 568 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 GNAI2P04899 355 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 UQCRFS1P1P0C7P4 283 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 TRIM27P14373 513 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms