RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
SDCBP-210ENST00000522843 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-210ENST00000522843 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
SDCBP-210ENST00000522843 SCHIP1Q9P0W5 487 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-210ENST00000522843 INSRP06213 1382 aa9.37□□□□□ -0.91
SDCBP-210ENST00000522843 LRRC69Q6ZNQ3 347 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 ABHD8Q96I13 439 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 NEUROD4Q9HD90 331 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 ZFP64Q9NPA5 681 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
SDCBP-210ENST00000522843 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
SDCBP-210ENST00000522843 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 CNTNAP1P78357 1384 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
SDCBP-210ENST00000522843 FAM229AH3BQW9 127 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 TEAD4Q15561 434 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 ARTNQ5T4W7 220 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 ZDHHC1Q8WTX9 485 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
SDCBP-210ENST00000522843 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
SDCBP-210ENST00000522843 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
SDCBP-210ENST00000522843 NFKBIEO00221 500 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 EML1O00423 815 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 FYB1O15117 783 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 RPS6KA4O75676 772 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 LMNB1P20700 586 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 NOS2P35228 1153 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 SOX11P35716 441 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 LBX1P52954 281 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
SDCBP-210ENST00000522843 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 ADAMTS7Q9UKP4 1686 aa9.34□□□□□ -0.91
SDCBP-210ENST00000522843 POLRMTO00411 1230 aaKnown RBP9.33□□□□□ -0.92
SDCBP-210ENST00000522843 HSPA8P11142 646 aaKnown RBP9.33□□□□□ -0.92
SDCBP-210ENST00000522843 PHKG2P15735 406 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 RFC4P35249 363 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-210ENST00000522843 RGS19P49795 217 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 PRSS36Q5K4E3 855 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
SDCBP-210ENST00000522843 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 SLC30A3Q99726 388 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 GPC6Q9Y625 555 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-210ENST00000522843 FLT4P35916 1363 aa9.33□□□□□ -0.92
SDCBP-210ENST00000522843 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
SDCBP-210ENST00000522843 ALBP02768 609 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 TM4SF1P30408 202 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 GRIK4Q16099 956 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 EML3Q32P44 896 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
SDCBP-210ENST00000522843 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
SDCBP-210ENST00000522843 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-210ENST00000522843 NID1P14543 1247 aa9.31□□□□□ -0.92
SDCBP-210ENST00000522843 MLLT1Q03111 559 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-210ENST00000522843 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
SDCBP-210ENST00000522843 TESK2Q96S53 571 aa9.31□□□□□ -0.92
SDCBP-210ENST00000522843 ZNF358Q9NW07 568 aa9.31□□□□□ -0.92
SDCBP-210ENST00000522843 TONSLQ96HA7 1378 aa9.31□□□□□ -0.92
SDCBP-210ENST00000522843 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
SDCBP-210ENST00000522843 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
SDCBP-210ENST00000522843 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-210ENST00000522843 ADH7P40394 386 aa9.3□□□□□ -0.92
SDCBP-210ENST00000522843 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
SDCBP-210ENST00000522843 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
SDCBP-210ENST00000522843 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
SDCBP-210ENST00000522843 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 TJP1Q07157 1748 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 C9orf172C9J069 976 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 GTF2IP78347 998 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 C20orf204Q6ZNR8 217 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 NBPF11Q86T75 865 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 SLC9A9Q8IVB4 645 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 IFNL2Q8IZJ0 200 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
SDCBP-210ENST00000522843 DICER1Q9UPY3 1922 aaKnown RBP9.29□□□□□ -0.92
SDCBP-210ENST00000522843 CCDC85CA6NKD9 419 aa9.28□□□□□ -0.92
SDCBP-210ENST00000522843 DDNO94850 711 aaPredicted RBP9.28□□□□□ -0.92
SDCBP-210ENST00000522843 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
SDCBP-210ENST00000522843 H2AFB2P0C5Z0 115 aa9.28□□□□□ -0.92
SDCBP-210ENST00000522843 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
SDCBP-210ENST00000522843 EPHA4P54764 986 aa9.28□□□□□ -0.92
SDCBP-210ENST00000522843 INTS5Q6P9B9 1019 aaKnown RBP9.28□□□□□ -0.92
SDCBP-210ENST00000522843 SERTM1A2A2V5 107 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 SKIP12755 728 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 TTLL6Q8N841 843 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms