RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 GLIS2Q9BZE0 524 aaPredicted RBP10.34□□□□□ -0.75
PVT1-213ENST00000522414 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
PVT1-213ENST00000522414 WTIPA6NIX2 430 aaPredicted RBP10.33□□□□□ -0.76
PVT1-213ENST00000522414 FIGNL2A6NMB9 653 aa10.33□□□□□ -0.76
PVT1-213ENST00000522414 CALD1Q05682 793 aaKnown RBP10.33□□□□□ -0.76
PVT1-213ENST00000522414 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
PVT1-213ENST00000522414 TRPM4Q8TD43 1214 aa10.33□□□□□ -0.76
PVT1-213ENST00000522414 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
PVT1-213ENST00000522414 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
PVT1-213ENST00000522414 H7C1D1 291 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 PSMD14O00487 310 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 LBX1P52954 281 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 PRPF38BQ5VTL8 546 aaKnown RBP10.32□□□□□ -0.76
PVT1-213ENST00000522414 CCDC30Q5VVM6 783 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 CYP4F22Q6NT55 531 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 G2E3Q7L622 706 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 VASH1Q7L8A9 365 aaPredicted RBP10.32□□□□□ -0.76
PVT1-213ENST00000522414 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 TBC1D16Q8TBP0 767 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 METTL22Q9BUU2 404 aaPredicted RBP10.32□□□□□ -0.76
PVT1-213ENST00000522414 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
PVT1-213ENST00000522414 PGAP2Q9UHJ9 254 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 MAP3K2Q9Y2U5 619 aa10.32□□□□□ -0.76
PVT1-213ENST00000522414 COL4A1P02462 1669 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 DUOX1Q9NRD9 1551 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 ZMYND10O75800 440 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 CELF2O95319 508 aaKnown RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 EGFRP00533 1210 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 PCCAP05165 728 aaPredicted RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 CTCFP49711 727 aaPredicted RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 CSPP1Q1MSJ5 1256 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 TBC1D10BQ4KMP7 808 aaPredicted RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 WWC1Q8IX03 1113 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 TRMT44Q8IYL2 757 aaKnown RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 CAPNS2Q96L46 248 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
PVT1-213ENST00000522414 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
PVT1-213ENST00000522414 RNF225M0QZC1 329 aaPredicted RBP10.3□□□□□ -0.76
PVT1-213ENST00000522414 ECE2O60344 883 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 PDE8AO60658 829 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 AOC2O75106 756 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 CBLBQ13191 982 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 KSR2Q6VAB6 950 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 CCDC116Q8IYX3 515 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 CCDC155Q8N6L0 562 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 ZNF408Q9H9D4 720 aa10.3□□□□□ -0.76
PVT1-213ENST00000522414 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
PVT1-213ENST00000522414 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
PVT1-213ENST00000522414 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 QPCTQ16769 361 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 CWF19L2Q2TBE0 894 aaKnown RBP10.29□□□□□ -0.76
PVT1-213ENST00000522414 CCDC152Q4G0S7 254 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 SAPCD2Q86UD0 394 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
PVT1-213ENST00000522414 DPF2Q92785 391 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 PRDM10Q9NQV6 1147 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
PVT1-213ENST00000522414 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 UFL1O94874 794 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 HSPA8P11142 646 aaKnown RBP10.28□□□□□ -0.76
PVT1-213ENST00000522414 TWISTNBQ3B726 338 aaPredicted RBP10.28□□□□□ -0.76
PVT1-213ENST00000522414 SVOPQ8N4V2 548 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 TTLL11Q8NHH1 800 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 TSC1Q92574 1164 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 EYA3Q99504 573 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 PODXL2Q9NZ53 605 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 GGA1Q9UJY5 639 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 THSD7BQ9C0I4 1608 aa10.28□□□□□ -0.76
PVT1-213ENST00000522414 ASTN2O75129 1339 aaPredicted RBP10.28□□□□□ -0.76
PVT1-213ENST00000522414 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 SPINT1O43278 529 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 VIL1P09327 827 aaKnown RBP10.27□□□□□ -0.77
PVT1-213ENST00000522414 SLURP2P0DP57 97 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 HSP90B1P14625 803 aaKnown RBP10.27□□□□□ -0.77
PVT1-213ENST00000522414 IRS1P35568 1242 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 ECE1P42892 770 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 CCDC27Q2M243 656 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 Q6ZVU0 165 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 ANKRD18AQ8IVF6 992 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 ZIC5Q96T25 663 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 GREM2Q9H772 168 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 MRS2Q9HD23 443 aa10.27□□□□□ -0.77
PVT1-213ENST00000522414 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 ADM5C9JUS6 153 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 H7C1W4 665 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 CTSWP56202 376 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms