RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LSG1Q9H089 658 aaKnown RBP28.9■■■□□ 2.22
PVT1-212ENST00000521951 EPB41L4AQ9HCS5 686 aaPredicted RBP28.9■■■□□ 2.22
PVT1-212ENST00000521951 ANO2Q9NQ90 1003 aa28.9■■■□□ 2.22
PVT1-212ENST00000521951 BAZ2AQ9UIF9 1905 aaKnown RBP28.9■■■□□ 2.22
PVT1-212ENST00000521951 PITPNM2Q9BZ72 1349 aa28.9■■■□□ 2.22
PVT1-212ENST00000521951 ENTPD3O75355 529 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 GIMAP6Q6P9H5 292 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 APOBEC3FQ8IUX4 373 aaKnown RBP28.89■■■□□ 2.22
PVT1-212ENST00000521951 ZFPM1Q8IX07 1006 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 DSCC1Q9BVC3 393 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 CLEC11AQ9Y240 323 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 MYH1P12882 1939 aa28.89■■■□□ 2.22
PVT1-212ENST00000521951 NAV1Q8NEY1 1877 aa28.89■■■□□ 2.21
PVT1-212ENST00000521951 CNTNAP1P78357 1384 aa28.89■■■□□ 2.21
PVT1-212ENST00000521951 FAM83AQ86UY5 434 aa28.89■■■□□ 2.21
PVT1-212ENST00000521951 DCPSQ96C86 337 aaKnown RBP28.89■■■□□ 2.21
PVT1-212ENST00000521951 TNFAIP1Q13829 316 aa28.88■■■□□ 2.21
PVT1-212ENST00000521951 ALX1Q15699 326 aa28.88■■■□□ 2.21
PVT1-212ENST00000521951 NACAP1Q9BZK3 213 aa28.88■■■□□ 2.21
PVT1-212ENST00000521951 OSBPL5Q9H0X9 879 aaPredicted RBP28.88■■■□□ 2.21
PVT1-212ENST00000521951 SEC24BO95487 1268 aa28.87■■■□□ 2.21
PVT1-212ENST00000521951 TNNI2P48788 182 aa28.87■■■□□ 2.21
PVT1-212ENST00000521951 FAM151AQ8WW52 585 aa28.87■■■□□ 2.21
PVT1-212ENST00000521951 DDRGK1Q96HY6 314 aa28.87■■■□□ 2.21
PVT1-212ENST00000521951 REC8O95072 547 aa28.86■■■□□ 2.21
PVT1-212ENST00000521951 FGAP02671 866 aa28.86■■■□□ 2.21
PVT1-212ENST00000521951 RASA3Q14644 834 aa28.86■■■□□ 2.21
PVT1-212ENST00000521951 MAP4K1Q92918 833 aa28.86■■■□□ 2.21
PVT1-212ENST00000521951 MCM9Q9NXL9 1143 aa28.86■■■□□ 2.21
PVT1-212ENST00000521951 SAP30BPQ9UHR5 308 aaKnown RBP28.86■■■□□ 2.21
PVT1-212ENST00000521951 TDO2P48775 406 aa28.85■■■□□ 2.21
PVT1-212ENST00000521951 LDHDQ86WU2 507 aa28.85■■■□□ 2.21
PVT1-212ENST00000521951 NAPBQ9H115 298 aa28.85■■■□□ 2.21
PVT1-212ENST00000521951 DEFB129Q9H1M3 183 aa28.85■■■□□ 2.21
PVT1-212ENST00000521951 TMEM39BQ9GZU3 492 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 PALD1Q9ULE6 856 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 DDX60LQ5H9U9 1706 aaKnown RBP28.84■■■□□ 2.21
PVT1-212ENST00000521951 USP17L12C9JPN9 530 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 USP17L21D6R901 530 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 CTR9Q6PD62 1173 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 SH3BP5LQ7L8J4 393 aa28.84■■■□□ 2.21
PVT1-212ENST00000521951 DDTLA6NHG4 134 aaPredicted RBP28.83■■■□□ 2.21
PVT1-212ENST00000521951 KIF3CO14782 793 aa28.83■■■□□ 2.21
PVT1-212ENST00000521951 EIF5BO60841 1220 aaKnown RBP28.83■■■□□ 2.21
PVT1-212ENST00000521951 KRT26Q7Z3Y9 468 aa28.83■■■□□ 2.21
PVT1-212ENST00000521951 SULF1Q8IWU6 871 aa28.83■■■□□ 2.21
PVT1-212ENST00000521951 BACH2Q9BYV9 841 aa28.83■■■□□ 2.21
PVT1-212ENST00000521951 ZMYM6O95789 1325 aa28.83■■■□□ 2.21
PVT1-212ENST00000521951 SBK1Q52WX2 424 aa28.82■■■□□ 2.2
PVT1-212ENST00000521951 ZSCAN29Q8IWY8 852 aaPredicted RBP28.82■■■□□ 2.2
PVT1-212ENST00000521951 ZNF784Q8NCA9 323 aaPredicted RBP28.82■■■□□ 2.2
PVT1-212ENST00000521951 RBM8AQ9Y5S9 174 aaKnown RBP28.82■■■□□ 2.2
PVT1-212ENST00000521951 U3KPZ7 1027 aaPredicted RBP28.82■■■□□ 2.2
PVT1-212ENST00000521951 COL2A1P02458 1487 aaPredicted RBP28.81■■■□□ 2.2
PVT1-212ENST00000521951 CYP2D7A0A087X1C5 515 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 ADM5C9JUS6 153 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 POLR3DP05423 398 aaPredicted RBP28.81■■■□□ 2.2
PVT1-212ENST00000521951 CYP2D6P10635 497 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 SLC4A8Q2Y0W8 1093 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 MAP1SQ66K74 1059 aaPredicted RBP28.81■■■□□ 2.2
PVT1-212ENST00000521951 USP48Q86UV5 1035 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 TEPSINQ96N21 525 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 DHX36Q9H2U1 1008 aaKnown RBP28.81■■■□□ 2.2
PVT1-212ENST00000521951 ARPP21Q9UBL0 812 aaPredicted RBP28.81■■■□□ 2.2
PVT1-212ENST00000521951 ATRNL1Q5VV63 1379 aa28.81■■■□□ 2.2
PVT1-212ENST00000521951 C12orf60Q5U649 245 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 CDC37L1Q7L3B6 337 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 CDAN1Q8IWY9 1227 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 USP26Q9BXU7 913 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 CTNNA3Q9UI47 895 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 PPP2R3BQ9Y5P8 575 aa28.8■■■□□ 2.2
PVT1-212ENST00000521951 MINDY4BA8MYZ0 360 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 EVX2Q03828 476 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 GLIS2Q9BZE0 524 aaPredicted RBP28.79■■■□□ 2.2
PVT1-212ENST00000521951 EPB41L2O43491 1005 aaKnown RBP28.79■■■□□ 2.2
PVT1-212ENST00000521951 PLCD1P51178 756 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 PRAMEF18Q5VWM3 479 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 DLK2Q6UY11 383 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 TTC6Q86TZ1 520 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 AMOTL1Q8IY63 956 aa28.79■■■□□ 2.2
PVT1-212ENST00000521951 SMIM22K7EJ46 135 aa28.78■■■□□ 2.2
PVT1-212ENST00000521951 CSRNP1Q96S65 589 aa28.78■■■□□ 2.2
PVT1-212ENST00000521951 LAMB1P07942 1786 aa28.77■■■□□ 2.2
PVT1-212ENST00000521951 NECTIN1Q15223 517 aa28.77■■■□□ 2.2
PVT1-212ENST00000521951 CHADLQ6NUI6 762 aa28.77■■■□□ 2.2
PVT1-212ENST00000521951 SIPA1L1O43166 1804 aa28.76■■■□□ 2.19
PVT1-212ENST00000521951 HLA-DOAP06340 250 aa28.76■■■□□ 2.19
PVT1-212ENST00000521951 HAND2P61296 217 aa28.76■■■□□ 2.19
PVT1-212ENST00000521951 PPARAQ07869 468 aa28.76■■■□□ 2.19
PVT1-212ENST00000521951 NBPF12Q5TAG4 269 aaPredicted RBP28.76■■■□□ 2.19
PVT1-212ENST00000521951 PI4KBQ9UBF8 816 aa28.76■■■□□ 2.19
PVT1-212ENST00000521951 ZNF213O14771 459 aa28.75■■■□□ 2.19
PVT1-212ENST00000521951 IMMTQ16891 758 aaKnown RBP28.75■■■□□ 2.19
PVT1-212ENST00000521951 ANAPC4Q9UJX5 808 aa28.74■■■□□ 2.19
PVT1-212ENST00000521951 LAMA4Q16363 1823 aa28.74■■■□□ 2.19
PVT1-212ENST00000521951 CYP21A2P08686 494 aa28.74■■■□□ 2.19
PVT1-212ENST00000521951 CTDSPL2Q05D32 466 aa28.74■■■□□ 2.19
PVT1-212ENST00000521951 CREB3L3Q68CJ9 461 aa28.74■■■□□ 2.19
PVT1-212ENST00000521951 FOXP4Q8IVH2 680 aaPredicted RBP28.74■■■□□ 2.19
PVT1-212ENST00000521951 SLC27A2O14975 620 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms