RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	VGLL4	Q14135	290 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TTF1	Q15361	905 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP3K11	Q16584	847 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	LDLRAD1	Q5T700	205 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ANKRD45	Q5TZF3	282 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAPKAPK5	Q8IW41	473 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CNKSR2	Q8WXI2	1034 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	HOOK2	Q96ED9	719 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	WNK4	Q96J92	1243 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	IDI2	Q9BXS1	227 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZNF341	Q9BYN7	854 aa		10.16	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MYH1	P12882	1939 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	FAM196B	A6NMK8	535 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ENTPD3	O75355	529 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP4K4	O95819	1239 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	HSPA8	P11142	646 aa	Known RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ATP5J	P18859	108 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	INPP5B	P32019	993 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	USP5	P45974	858 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	CTCF	P49711	727 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	LBX1	P52954	281 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	MAP3K9	P80192	1104 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SLFNL1	Q499Z3	407 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SPRYD7	Q5W111	196 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	B4GALNT3	Q6L9W6	998 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SH3BP5L	Q7L8J4	393 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	TGFBRAP1	Q8WUH2	860 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	OPTN	Q96CV9	577 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	OTUD5	Q96G74	571 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	HAUS7	Q99871	368 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	ECHDC1	Q9NTX5	307 aa		10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	SAP30BP	Q9UHR5	308 aa	Known RBP	10.15	□□□□□ -0.78
CTNNA1-231	ENST00000521941	DOCK1	Q14185	1865 aa		10.15	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SIPA1L1	O43166	1804 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ATAD5	Q96QE3	1844 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	FLT1	P17948	1338 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ZNF532	Q9HCE3	1301 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TRPA1	O75762	1119 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PDE6A	P16499	860 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PLCG2	P16885	1265 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	GJA5	P36382	358 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SLC9C2	Q5TAH2	1124 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SNCAIP	Q9Y6H5	919 aa		10.14	□□□□□ -0.79
CTNNA1-231	ENST00000521941	MAGEB6P1	A0A0J9YX57	407 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CHGB	P05060	677 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SREBF2	Q12772	1141 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	HDAC1	Q13547	482 aa	Predicted RBP	10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	GCC1	Q96CN9	775 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	LNPK	Q9C0E8	428 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	RWDD1	Q9H446	243 aa	Predicted RBP	10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	LAMB1	P07942	1786 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ATRNL1	Q5VV63	1379 aa		10.13	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CASP8AP2	Q9UKL3	1982 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	MANSC4	A6NHS7	340 aa	Predicted RBP	10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	IGHD	P01880	384 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ZBTB48	P10074	688 aa	Predicted RBP	10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	MX1	P20591	662 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ADD2	P35612	726 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PPP4C	P60510	307 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	AAMP	Q13685	434 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	LCORL	Q8N3X6	602 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TRIM34	Q9BYJ4	488 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.12	□□□□□ -0.79	2e-13	■■■□□ 15
CTNNA1-231	ENST00000521941	RNF186	Q9NXI6	227 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PALD1	Q9ULE6	856 aa		10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	DDX60L	Q5H9U9	1706 aa	Known RBP	10.12	□□□□□ -0.79
CTNNA1-231	ENST00000521941	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	COL2A1	P02458	1487 aa	Predicted RBP	10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TTC41P	Q6P2S7	1318 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TCRBV5S4A2T	A0A5A2	114 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SPDYE5	A6NIY4	337 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ERC2	O15083	957 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CA12	O43570	354 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	MBD4	O95243	580 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CCDC84	Q86UT8	332 aa	Predicted RBP	10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	PI4K2B	Q8TCG2	481 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	SDR42E1	Q8WUS8	393 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ARMT1	Q9H993	441 aa		10.11	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CCL15-CCL14	A0A0B4J2E2	113 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	UNCX	A6NJT0	531 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	IGSF3	O75054	1194 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	NPM3	O75607	178 aa	Known RBP	10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	GLRX3	O76003	335 aa	Known RBP	10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	TBC1D8	O95759	1140 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	HLA-DOA	P06340	250 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	CCL15	Q16663	113 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ZSCAN25	Q6NSZ9	544 aa		10.1	□□□□□ -0.79
CTNNA1-231	ENST00000521941	ERO1B	Q86YB8	467 aa		10.1	□□□□□ -0.79

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