RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CTAGE4Q8IX94 777 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 TRIM37O94972 964 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 USP48Q86UV5 1035 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 IQUBQ8NA54 791 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 DHX58Q96C10 678 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 FAM13AO94988 1023 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 SLC1A4P43007 532 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 TTF2Q9UNY4 1162 aaKnown RBP18.27■□□□□ 0.52
USP42-207ENST00000521713 BACH1O14867 736 aa18.27■□□□□ 0.51
USP42-207ENST00000521713 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.51
USP42-207ENST00000521713 PHACTR2O75167 634 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 PRDM1O75626 825 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 MCM7P33993 719 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
USP42-207ENST00000521713 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 SPECC1Q5M775 1068 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 IVNS1ABPQ9Y6Y0 642 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 TBC1D5Q92609 795 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 GOLGA1Q92805 767 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 IMPG2Q9BZV3 1241 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 SYNMO15061 1565 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
USP42-207ENST00000521713 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■□□□ 12.4
USP42-207ENST00000521713 UBE4AQ14139 1066 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
USP42-207ENST00000521713 RSPH14Q9UHP6 348 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
USP42-207ENST00000521713 CAPN2P17655 700 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 USP40Q9NVE5 1235 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 EBAG9O00559 213 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 GPR162Q16538 588 aa18.25■□□□□ 0.51
USP42-207ENST00000521713 CCDC113Q9H0I3 377 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 COPRSQ9NQ92 184 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 ZBED4O75132 1171 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 BICDL2A1A5D9 508 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 AKR1B10O60218 316 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 DNAI1Q9UI46 699 aa18.24■□□□□ 0.51
USP42-207ENST00000521713 DKC1O60832 514 aaKnown RBP eCLIP18.23■□□□□ 0.51
USP42-207ENST00000521713 IFI16Q16666 785 aaKnown RBP18.23■□□□□ 0.51
USP42-207ENST00000521713 LETM2Q2VYF4 491 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 NSRP1Q9H0G5 558 aaKnown RBP18.23■□□□□ 0.51
USP42-207ENST00000521713 V9GY48 417 aaPredicted RBP18.23■□□□□ 0.51
USP42-207ENST00000521713 PLCD1P51178 756 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 UBASH3AP57075 661 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 ERVV-1B6SEH8 477 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 TCP10Q12799 353 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 HLTFQ14527 1009 aaKnown RBP eCLIP18.23■□□□□ 0.51
USP42-207ENST00000521713 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 SNX14Q9Y5W7 946 aa18.23■□□□□ 0.51
USP42-207ENST00000521713 CTNNA2P26232 953 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 CHRNDQ07001 517 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 ANO6Q4KMQ2 910 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 FCHSD1Q86WN1 690 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 GOPCQ9HD26 462 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
USP42-207ENST00000521713 STK24Q9Y6E0 443 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 BBOX1O75936 387 aa18.22■□□□□ 0.51
USP42-207ENST00000521713 APBB1IPQ7Z5R6 666 aaPredicted RBP18.22■□□□□ 0.51
USP42-207ENST00000521713 RRAGDQ9NQL2 400 aaPredicted RBP18.22■□□□□ 0.51
USP42-207ENST00000521713 XDHP47989 1333 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 PDE8BO95263 885 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 SERPINB2P05120 415 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 SYT1P21579 422 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 PPP1R2P41236 205 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 NOP2P46087 812 aaKnown RBP18.21■□□□□ 0.51
USP42-207ENST00000521713 TFAP4Q01664 338 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 C6orf163Q5TEZ5 329 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 DCAF15Q66K64 600 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 ZNF830Q96NB3 372 aaPredicted RBP18.21■□□□□ 0.51
USP42-207ENST00000521713 SEMA3EO15041 775 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 GYG1P46976 350 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 GPR108Q9NPR9 543 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
USP42-207ENST00000521713 CIAO1O76071 339 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 SPATA24Q86W54 205 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 DDX12PQ92771 950 aa18.21■□□□□ 0.51
USP42-207ENST00000521713 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.51
USP42-207ENST00000521713 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
USP42-207ENST00000521713 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.5
USP42-207ENST00000521713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.21■□□□□ 0.5
USP42-207ENST00000521713 MMRN2Q9H8L6 949 aa18.21■□□□□ 0.5
USP42-207ENST00000521713 ADGRL3Q9HAR2 1447 aa18.21■□□□□ 0.5
USP42-207ENST00000521713 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 CPA1P15085 419 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms