RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ADMP35318 185 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 ERVK-24P63145 666 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 ZNF252P-AS1Q0IIN9 211 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 ZC3H12AQ5D1E8 599 aaKnown RBP5.62□□□□□ -1.51
VPS13B-209ENST00000521559 OGFOD3Q6PK18 319 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 SEZ6L2Q6UXD5 910 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 SV2BQ7L1I2 683 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 SSU72Q9NP77 194 aaKnown RBP5.62□□□□□ -1.51
VPS13B-209ENST00000521559 DISC1Q9NRI5 854 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 TTF2Q9UNY4 1162 aaKnown RBP5.62□□□□□ -1.51
VPS13B-209ENST00000521559 PCDHGC5Q9Y5F6 944 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 AK5Q9Y6K8 562 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 FAM170BA6NMN3 283 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 LMNB1P20700 586 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 BMP6P22004 513 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 TTLL4Q14679 1199 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 RNF214Q8ND24 703 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 STK35Q8TDR2 534 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 GPBAR1Q8TDU6 330 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 GATA6Q92908 595 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 PICK1Q9NRD5 415 aa5.61□□□□□ -1.51
VPS13B-209ENST00000521559 ANGEL1Q9UNK9 670 aaKnown RBP5.61□□□□□ -1.51
VPS13B-209ENST00000521559 FBXO24O75426 580 aa5.6□□□□□ -1.51
VPS13B-209ENST00000521559 GP2P55259 537 aaKnown RBP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 XPCQ01831 940 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 DIEXFQ68CQ4 756 aaKnown RBP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 DUSP9Q99956 384 aaKnown RBP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 C1GALT1Q9NS00 363 aa5.6□□□□□ -1.51
VPS13B-209ENST00000521559 BSDC1Q9NW68 430 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-209ENST00000521559 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
VPS13B-209ENST00000521559 UNC13AQ9UPW8 1703 aa5.6□□□□□ -1.51
VPS13B-209ENST00000521559 FANCGO15287 622 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 RLBP1P12271 317 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 HCLS1P14317 486 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-209ENST00000521559 HOXA10P31260 410 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-209ENST00000521559 MSMPQ1L6U9 139 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 PCNX4Q63HM2 1172 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 ZNF765Q7L2R6 523 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 CDC37L1Q7L3B6 337 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 VSIG10LQ86VR7 867 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 KCT2Q8NC54 265 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 FBXL18Q96ME1 805 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 LGR6Q9HBX8 967 aa5.59□□□□□ -1.51
VPS13B-209ENST00000521559 DYNC1LI2O43237 492 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-209ENST00000521559 PAGE1O75459 146 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 PRNPP04156 253 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 IRAK1P51617 712 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 RPS26P62854 115 aaKnown RBP5.58□□□□□ -1.52
VPS13B-209ENST00000521559 PSMD2Q13200 908 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 CCDC85BQ15834 202 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-209ENST00000521559 CCDC27Q2M243 656 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 GRIN3AQ8TCU5 1115 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 BCL11AQ9H165 835 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 LRRC4CQ9HCJ2 640 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 PCDHA4Q9UN74 947 aa5.58□□□□□ -1.52
VPS13B-209ENST00000521559 CELA3AP09093 270 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 FAM87AP0C7U9 286 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 ARHGAP27Q6ZUM4 889 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 HDXQ7Z353 690 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 NPAS4Q8IUM7 802 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 SHISA5Q8N114 240 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 STK11IPQ8N1F8 1099 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 ZNF507Q8TCN5 953 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 ISL2Q96A47 359 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 PARP2Q9UGN5 583 aa5.57□□□□□ -1.52
VPS13B-209ENST00000521559 DCDC2CA8MYV0 355 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 DAB2P98082 770 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 CDK5R2Q13319 367 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 PPM1JQ5JR12 505 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 DNAJC14Q6Y2X3 702 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-209ENST00000521559 AGBL5Q8NDL9 886 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 MISP3Q96FF7 219 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 GZF1Q9H116 711 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-209ENST00000521559 MKNK2Q9HBH9 465 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 CCDC39Q9UFE4 941 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 SNCAIPQ9Y6H5 919 aa5.56□□□□□ -1.52
VPS13B-209ENST00000521559 NEFMP07197 916 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 ST13P50502 369 aaKnown RBP5.55□□□□□ -1.52
VPS13B-209ENST00000521559 RING1Q06587 406 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 TAF1CQ15572 869 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-209ENST00000521559 MPRIPQ6WCQ1 1025 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 TMC4Q7Z404 712 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 C12orf40Q86WS4 652 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 MRS2Q9HD23 443 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 ZC3H7BQ9UGR2 993 aaKnown RBP5.55□□□□□ -1.52
VPS13B-209ENST00000521559 CSADQ9Y600 493 aa5.55□□□□□ -1.52
VPS13B-209ENST00000521559 OAS3Q9Y6K5 1087 aaKnown RBP5.55□□□□□ -1.52
VPS13B-209ENST00000521559 CECR2Q9BXF3 1484 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 COL17A1Q9UMD9 1497 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-209ENST00000521559 SORBS3O60504 671 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 ZBTB37Q5TC79 503 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 TP53INP2Q8IXH6 220 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 NETO1Q8TDF5 533 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 PSMG3-AS1Q96PY0 264 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 NOC4LQ9BVI4 516 aaKnown RBP5.54□□□□□ -1.52
VPS13B-209ENST00000521559 DUSP23Q9BVJ7 150 aa5.54□□□□□ -1.52
VPS13B-209ENST00000521559 GTF2IRD1Q9UHL9 959 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms