RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 NECAB2Q7Z6G3 386 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
MRPS28-207ENST00000521434 PUS3Q9BZE2 481 aaKnown RBP11.23□□□□□ -0.61
MRPS28-207ENST00000521434 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-207ENST00000521434 SUGT1Q9Y2Z0 365 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 MROH5Q6ZUA9 1318 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 F6X3S4 739 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 CXCL11O14625 94 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
MRPS28-207ENST00000521434 LRIT3Q3SXY7 679 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 Q7L0L9 218 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 DOCK2Q92608 1830 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
MRPS28-207ENST00000521434 TNPO2O14787 897 aaKnown RBP11.21□□□□□ -0.61
MRPS28-207ENST00000521434 BCAMP50895 628 aa11.21□□□□□ -0.61
MRPS28-207ENST00000521434 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.61
MRPS28-207ENST00000521434 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
MRPS28-207ENST00000521434 C9orf78Q9NZ63 289 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-207ENST00000521434 VCANP13611 3396 aa11.21□□□□□ -0.62
MRPS28-207ENST00000521434 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.62
MRPS28-207ENST00000521434 A0A0G2JLL6 359 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 TCP10Q12799 353 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 CCDC27Q2M243 656 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 PRRT2Q7Z6L0 340 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 C7orf61Q8IZ16 206 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 SLC45A1Q9Y2W3 748 aa11.2□□□□□ -0.62
MRPS28-207ENST00000521434 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
MRPS28-207ENST00000521434 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 IL16Q14005 1332 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 VAMP4O75379 141 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 WWC1Q8IX03 1113 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 COA7Q96BR5 231 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
MRPS28-207ENST00000521434 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 ZHX2Q9Y6X8 837 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
MRPS28-207ENST00000521434 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 PDE8BO95263 885 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 MAGEA10P43363 369 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-207ENST00000521434 NFIAQ12857 509 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 GADL1Q6ZQY3 521 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 VGLL2Q8N8G2 317 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-207ENST00000521434 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 PRKRIP1Q9H875 184 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-207ENST00000521434 PICK1Q9NRD5 415 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 DAGLAQ9Y4D2 1042 aa11.18□□□□□ -0.62
MRPS28-207ENST00000521434 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 PHF20L1A8MW92 1017 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 SYN1P17600 705 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 PTPRAP18433 802 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 LRRC24Q50LG9 513 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
MRPS28-207ENST00000521434 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 KAZALD1Q96I82 304 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
MRPS28-207ENST00000521434 TTC28Q96AY4 2481 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 HMGCRP04035 888 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
MRPS28-207ENST00000521434 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
MRPS28-207ENST00000521434 SRCIN1Q9C0H9 1055 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 C11orf49Q9H6J7 331 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
MRPS28-207ENST00000521434 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
MRPS28-207ENST00000521434 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 PLXNB2O15031 1838 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
MRPS28-207ENST00000521434 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
MRPS28-207ENST00000521434 PUM3Q15397 648 aaKnown RBP11.15□□□□□ -0.62
MRPS28-207ENST00000521434 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
MRPS28-207ENST00000521434 SLC4A10Q6U841 1118 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 BICC1Q9H694 974 aaKnown RBP11.15□□□□□ -0.62
MRPS28-207ENST00000521434 USP40Q9NVE5 1235 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 AGTPBP1Q9UPW5 1226 aa11.15□□□□□ -0.62
MRPS28-207ENST00000521434 LOC285556D6RIA3 1793 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
MRPS28-207ENST00000521434 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms