RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 FOXK2Q01167 660 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 XAGE3Q8WTP9 111 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 CXXC1Q9P0U4 656 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 KCNH4Q9UQ05 1017 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 ECM29Q5VYK3 1845 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 TNPO2O14787 897 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 HMGCRP04035 888 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 DNAJB2P25686 324 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 EPHB4P54760 987 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 AIMP1Q12904 312 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 RTF1Q92541 710 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 ZNF70Q9UC06 446 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 GJD2Q9UKL4 321 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 BAHCC1Q9P281 2608 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 C5orf42Q9H799 3197 aa9.53□□□□□ -0.88
CTNNA1-227ENST00000521387 ATP5J2-PTCD1G3V325 749 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 PI4K2BG5E9Z4 385 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 PPATQ06203 517 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 BADQ92934 168 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 PARK7Q99497 189 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 PRDM12Q9H4Q4 367 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 CD320Q9NPF0 282 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 MINPP1Q9UNW1 487 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 DCHS1Q96JQ0 3298 aa9.52□□□□□ -0.89
CTNNA1-227ENST00000521387 MYO1BO43795 1136 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 KRT37O76014 449 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 RIC3Q7Z5B4 369 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 TRIB2Q92519 343 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 WRNIP1Q96S55 665 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 TDRD3Q9H7E2 651 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 ZFHX4Q86UP3 3567 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 EPG5Q9HCE0 2579 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
CTNNA1-227ENST00000521387 MAST2Q6P0Q8 1798 aa9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 PRR33A8MZF0 331 aa9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 TCP10L2B9ZVM9 353 aa9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 EIF2S2P20042 333 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 INPP5BP32019 993 aa9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 ANKS1AQ92625 1134 aa9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 GAS2L1Q99501 681 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-227ENST00000521387 TLL1O43897 1013 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 ITGB8P26012 769 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 CCDC184Q52MB2 194 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 SENP6Q9GZR1 1112 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 CD209Q9NNX6 404 aa9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 PTPRZ1P23471 2315 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-227ENST00000521387 ZNF318Q5VUA4 2279 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 TRIM43BA6NCK2 446 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 PBX2P40425 430 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 RTP1P59025 263 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 TNFAIP1Q13829 316 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 ANKRD18AQ8IVF6 992 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 TRIM43Q96BQ3 446 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 COA7Q96BR5 231 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 RNPC3Q96LT9 517 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 PRKRIP1Q9H875 184 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
CTNNA1-227ENST00000521387 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 TRIM28Q13263 835 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 JARID2Q92833 1246 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 ARAP2Q8WZ64 1704 aa9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 ZFHX2Q9C0A1 2572 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-227ENST00000521387 SNAP23O00161 211 aa9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 IGFBP4P22692 258 aa9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 RBM5P52756 815 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 CACNB2Q08289 660 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 BSDC1Q9NW68 430 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 LEMD3Q9Y2U8 911 aa9.46□□□□□ -0.9
CTNNA1-227ENST00000521387 PLXNB2O15031 1838 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 GRXCR1A8MXD5 290 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 ERC2O15083 957 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 CACNB3P54284 484 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 FKBP1AP62942 108 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 GSE1Q14687 1217 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 ANKRD13CQ8N6S4 541 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 PLBD2Q8NHP8 589 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 PDLIM7Q9NR12 457 aa9.45□□□□□ -0.9
CTNNA1-227ENST00000521387 ZNF112Q9UJU3 913 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms