RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CSRNP1Q96S65 589 aa8.3□□□□□ -1.08
CLK4-207ENST00000520909 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
CLK4-207ENST00000520909 GPN3Q9UHW5 284 aaPredicted RBP8.3□□□□□ -1.08
CLK4-207ENST00000520909 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
CLK4-207ENST00000520909 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
CLK4-207ENST00000520909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
CLK4-207ENST00000520909 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 GPR182O15218 404 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 LEFTY1O75610 366 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
CLK4-207ENST00000520909 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
CLK4-207ENST00000520909 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 DUSP23Q9BVJ7 150 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 FCGRTP55899 365 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 TMEM40Q8WWA1 233 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 FAM168AQ92567 244 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 DMRTB1Q96MA1 342 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 NLRP2Q9NX02 1062 aa8.29□□□□□ -1.08
CLK4-207ENST00000520909 IGHA2P01877 340 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 CEACAM5P06731 702 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
CLK4-207ENST00000520909 CD96P40200 585 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 OXCT1P55809 520 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 PKN1Q16512 942 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLK4-207ENST00000520909 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
CLK4-207ENST00000520909 ZNF124Q15973 351 aa8.27□□□□□ -1.09
CLK4-207ENST00000520909 PDZD3Q86UT5 571 aa8.27□□□□□ -1.09
CLK4-207ENST00000520909 LRRN4CLQ8ND94 238 aa8.27□□□□□ -1.09
CLK4-207ENST00000520909 DBX1A6NMT0 343 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 ARNTP27540 789 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 ZC3H12AQ5D1E8 599 aaKnown RBP8.26□□□□□ -1.09
CLK4-207ENST00000520909 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
CLK4-207ENST00000520909 KSR1Q8IVT5 923 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 SULF2Q8IWU5 870 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 RNF214Q8ND24 703 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 ALKBH8Q96BT7 664 aaKnown RBP8.26□□□□□ -1.09
CLK4-207ENST00000520909 PLAGL2Q9UPG8 496 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 SNX11Q9Y5W9 270 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 U3KQE9 123 aa8.26□□□□□ -1.09
CLK4-207ENST00000520909 NEFMP07197 916 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 ISL2Q96A47 359 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 EMILIN2Q9BXX0 1053 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 RBCK1Q9BYM8 510 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
CLK4-207ENST00000520909 ERVK-24P63145 666 aa8.24□□□□□ -1.09
CLK4-207ENST00000520909 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
CLK4-207ENST00000520909 SLC23A3Q6PIS1 610 aa8.24□□□□□ -1.09
CLK4-207ENST00000520909 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
CLK4-207ENST00000520909 SLC38A3Q99624 504 aa8.24□□□□□ -1.09
CLK4-207ENST00000520909 BCO2Q9BYV7 579 aa8.24□□□□□ -1.09
CLK4-207ENST00000520909 ITIH2P19823 946 aa8.23□□□□□ -1.09
CLK4-207ENST00000520909 NME2P22392 152 aa8.23□□□□□ -1.09
CLK4-207ENST00000520909 STK35Q8TDR2 534 aa8.23□□□□□ -1.09
CLK4-207ENST00000520909 GTF2IRD1Q9UHL9 959 aa8.23□□□□□ -1.09
CLK4-207ENST00000520909 FBLN7Q53RD9 439 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 ACSBG1Q96GR2 724 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 HEXIM2Q96MH2 286 aaKnown RBP8.22□□□□□ -1.09
CLK4-207ENST00000520909 KRTAP4-5Q9BYR2 181 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 TNKS2Q9H2K2 1166 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 CBX8Q9HC52 389 aa8.22□□□□□ -1.09
CLK4-207ENST00000520909 PI16Q6UXB8 463 aa8.21□□□□□ -1.1
CLK4-207ENST00000520909 CCER1Q8TC90 406 aaPredicted RBP8.21□□□□□ -1.1
CLK4-207ENST00000520909 GPBAR1Q8TDU6 330 aa8.21□□□□□ -1.1
CLK4-207ENST00000520909 IGF2BP3O00425 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLK4-207ENST00000520909 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
CLK4-207ENST00000520909 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CLK4-207ENST00000520909 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
CLK4-207ENST00000520909 ZNF252P-AS1Q0IIN9 211 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 IKZF1Q13422 519 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 NXPE4Q6UWF7 544 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 SPOCD1Q6ZMY3 1216 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 SAMM50Q9Y512 469 aa8.19□□□□□ -1.1
CLK4-207ENST00000520909 LRRC10BA6NIK2 292 aa8.18□□□□□ -1.1
CLK4-207ENST00000520909 ZP2Q05996 745 aa8.18□□□□□ -1.1
CLK4-207ENST00000520909 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLK4-207ENST00000520909 ZSWIM9Q86XI8 627 aa8.18□□□□□ -1.1
CLK4-207ENST00000520909 PRDM7Q9NQW5 492 aa8.18□□□□□ -1.1
CLK4-207ENST00000520909 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 PDE4CQ08493 712 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 KCNMB1Q16558 191 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 CDC37L1Q7L3B6 337 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 CSADQ9Y600 493 aa8.17□□□□□ -1.1
CLK4-207ENST00000520909 GNAT3A8MTJ3 354 aa8.16□□□□□ -1.1
CLK4-207ENST00000520909 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
CLK4-207ENST00000520909 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
CLK4-207ENST00000520909 FANCGO15287 622 aa8.15□□□□□ -1.1
CLK4-207ENST00000520909 MESP2Q0VG99 397 aa8.15□□□□□ -1.1
CLK4-207ENST00000520909 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
CLK4-207ENST00000520909 C12orf40Q86WS4 652 aa8.15□□□□□ -1.1
CLK4-207ENST00000520909 SPACA3Q8IXA5 215 aa8.15□□□□□ -1.1
CLK4-207ENST00000520909 BHLHE22Q8NFJ8 381 aaPredicted RBP8.15□□□□□ -1.1
CLK4-207ENST00000520909 CEP44Q9C0F1 390 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms