RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 FAM109BQ6ICB4 259 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 CDC42EP5Q6NZY7 148 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 DAGLAQ9Y4D2 1042 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
SRGAP3-212ENST00000520860 GUCD1Q96NT3 240 aa16.54■□□□□ 0.24
SRGAP3-212ENST00000520860 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 WDR66Q8TBY9 1149 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 FAM161BQ96MY7 647 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 OGDHLQ9ULD0 1010 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
SRGAP3-212ENST00000520860 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 PDE8BO95263 885 aa16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 USP40Q9NVE5 1235 aa16.52■□□□□ 0.24
SRGAP3-212ENST00000520860 PFASO15067 1338 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 UNC80Q8N2C7 3258 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 MDM2Q00987 491 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 TRIM32Q13049 653 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 ZNF697Q5TEC3 545 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 PTPRFP10586 1907 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
SRGAP3-212ENST00000520860 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
SRGAP3-212ENST00000520860 GCLCP48506 637 aaPredicted RBP16.5■□□□□ 0.23
SRGAP3-212ENST00000520860 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
SRGAP3-212ENST00000520860 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
SRGAP3-212ENST00000520860 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
SRGAP3-212ENST00000520860 IL16Q14005 1332 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 DOCK2Q92608 1830 aa16.49■□□□□ 0.23
SRGAP3-212ENST00000520860 ENTPD3O75355 529 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 VAMP4O75379 141 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 LDHBP07195 334 aaKnown RBP16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 RGS3P49796 1198 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 TRIB2Q92519 343 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
SRGAP3-212ENST00000520860 SLC5A1P13866 664 aa16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 PRDX5P30044 214 aa16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 LRRC26Q2I0M4 334 aa16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 DOCK1Q14185 1865 aa16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 COL2A1P02458 1487 aaPredicted RBP16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
SRGAP3-212ENST00000520860 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 COL6A1P12109 1028 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 CYP2B6P20813 491 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 FGFR2P21802 821 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 IDI2Q9BXS1 227 aa16.46■□□□□ 0.23
SRGAP3-212ENST00000520860 MAP3K10Q02779 954 aa16.45■□□□□ 0.22
SRGAP3-212ENST00000520860 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
SRGAP3-212ENST00000520860 CDX2Q99626 313 aaPredicted RBP16.45■□□□□ 0.22
SRGAP3-212ENST00000520860 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
SRGAP3-212ENST00000520860 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
SRGAP3-212ENST00000520860 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
SRGAP3-212ENST00000520860 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 XRCC5P13010 732 aaKnown RBP16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 HMGCS2P54868 508 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 SPP2Q13103 211 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 LPIN2Q92539 896 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 PRKAG2Q9UGJ0 569 aa16.43■□□□□ 0.22
SRGAP3-212ENST00000520860 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms