RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 A0A1W2PQ27 194 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 A0A1W2PQ64 194 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 A0A1W2PQD8 194 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 SYNE3Q6ZMZ3 975 aa29.93■■■□□ 2.38
COL13A1-213ENST00000520267 FMR1NBQ8N0W7 255 aaPredicted RBP29.93■■■□□ 2.38
COL13A1-213ENST00000520267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.92■■■□□ 2.38
COL13A1-213ENST00000520267 SPTLC2O15270 562 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 PPARAQ07869 468 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 NBPF5PQ86XG9 351 aaPredicted RBP29.92■■■□□ 2.38
COL13A1-213ENST00000520267 TDRD7Q8NHU6 1098 aaKnown RBP29.92■■■□□ 2.38
COL13A1-213ENST00000520267 A0A1B0GVL5 298 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 UBE2Q2LH0YL09 131 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 KLRK1P26718 216 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 ANO1Q5XXA6 986 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 AMIGO3Q86WK7 504 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 NLRP3Q96P20 1036 aa29.92■■■□□ 2.38
COL13A1-213ENST00000520267 RIOK1Q9BRS2 568 aaKnown RBP29.92■■■□□ 2.38
COL13A1-213ENST00000520267 NHSQ6T4R5 1651 aa29.91■■■□□ 2.38
COL13A1-213ENST00000520267 ZPR1O75312 459 aa29.91■■■□□ 2.38
COL13A1-213ENST00000520267 RPS8P62241 208 aaKnown RBP29.91■■■□□ 2.38
COL13A1-213ENST00000520267 CCNL1Q9UK58 526 aaPredicted RBP29.91■■■□□ 2.38
COL13A1-213ENST00000520267 USP21Q9UK80 565 aa29.91■■■□□ 2.38
COL13A1-213ENST00000520267 NDUFA8P51970 172 aa29.9■■■□□ 2.38
COL13A1-213ENST00000520267 KIAA2012Q0VF49 1180 aa29.9■■■□□ 2.38
COL13A1-213ENST00000520267 WTAPQ15007 396 aa29.9■■■□□ 2.38
COL13A1-213ENST00000520267 MINDY4BA8MYZ0 360 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 SMIM22K7EJ46 135 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 DYNLL1P63167 89 aaKnown RBP29.89■■■□□ 2.38
COL13A1-213ENST00000520267 C11orf57Q6ZUT1 292 aaPredicted RBP29.89■■■□□ 2.38
COL13A1-213ENST00000520267 FBXO33Q7Z6M2 555 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 SPC24Q8NBT2 197 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 ZNF384Q8TF68 577 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 SLC26A6Q9BXS9 759 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 RNF41Q9H4P4 317 aaPredicted RBP29.89■■■□□ 2.38
COL13A1-213ENST00000520267 THSD7AQ9UPZ6 1657 aa29.89■■■□□ 2.38
COL13A1-213ENST00000520267 NID2Q14112 1375 aa29.89■■■□□ 2.37
COL13A1-213ENST00000520267 SSRP1Q08945 709 aaKnown RBP29.88■■■□□ 2.37
COL13A1-213ENST00000520267 BAZ2AQ9UIF9 1905 aaKnown RBP29.88■■■□□ 2.37
COL13A1-213ENST00000520267 SART3Q15020 963 aaKnown RBP29.88■■■□□ 2.37
COL13A1-213ENST00000520267 STX1AQ16623 288 aa29.88■■■□□ 2.37
COL13A1-213ENST00000520267 RTCBQ9Y3I0 505 aaKnown RBP29.88■■■□□ 2.37
COL13A1-213ENST00000520267 STK36Q9NRP7 1315 aa29.88■■■□□ 2.37
COL13A1-213ENST00000520267 MYH13Q9UKX3 1938 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 FMNL1O95466 1100 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-213ENST00000520267 CAVIN2O95810 425 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 ARHGEF1Q92888 912 aaKnown RBP29.87■■■□□ 2.37
COL13A1-213ENST00000520267 ANAPC4Q9UJX5 808 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 A0A087WWV3 80 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 IFNAR1P17181 557 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 IQCB1Q15051 598 aa29.87■■■□□ 2.37
COL13A1-213ENST00000520267 ERCC4Q92889 916 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-213ENST00000520267 TAF1LQ8IZX4 1826 aa29.86■■■□□ 2.37
COL13A1-213ENST00000520267 ERICH2A1L162 156 aa29.86■■■□□ 2.37
COL13A1-213ENST00000520267 TPTE2Q6XPS3 522 aa29.86■■■□□ 2.37
COL13A1-213ENST00000520267 TRIM29Q14134 588 aa29.85■■■□□ 2.37
COL13A1-213ENST00000520267 RTN1Q16799 776 aa29.85■■■□□ 2.37
COL13A1-213ENST00000520267 AXDND1Q5T1B0 1012 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-213ENST00000520267 MTA3Q9BTC8 594 aa29.85■■■□□ 2.37
COL13A1-213ENST00000520267 TFCP2L1Q9NZI6 479 aa29.85■■■□□ 2.37
COL13A1-213ENST00000520267 GNL2Q13823 731 aaKnown RBP29.85■■■□□ 2.37
COL13A1-213ENST00000520267 SLC39A14Q15043 492 aa29.85■■■□□ 2.37
COL13A1-213ENST00000520267 WDHD1O75717 1129 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-213ENST00000520267 U2AF2P26368 475 aaKnown RBP eCLIP29.84■■■□□ 2.37
COL13A1-213ENST00000520267 GUCY1A2P33402 732 aa29.84■■■□□ 2.37
COL13A1-213ENST00000520267 SEMA3EO15041 775 aa29.84■■■□□ 2.37
COL13A1-213ENST00000520267 MYH2Q9UKX2 1941 aa29.84■■■□□ 2.37
COL13A1-213ENST00000520267 MARCKSP29966 332 aaPredicted RBP29.83■■■□□ 2.37
COL13A1-213ENST00000520267 PLA2G4DQ86XP0 818 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 TMTC2Q8N394 836 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 PIBF1Q8WXW3 757 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 SDF4Q9BRK5 362 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.83■■■□□ 2.37
COL13A1-213ENST00000520267 KCNF1Q9H3M0 494 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 CYP2D7A0A087X1C5 515 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 TM4SF1P30408 202 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 ZNF75DP51815 510 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 UBAC1Q9BSL1 405 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 TRIM5Q9C035 493 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 ANKRD2Q9GZV1 360 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 LY75O60449 1722 aa29.83■■■□□ 2.37
COL13A1-213ENST00000520267 NBPF11Q86T75 865 aa29.82■■■□□ 2.36
COL13A1-213ENST00000520267 ZNF654Q8IZM8 581 aa29.82■■■□□ 2.36
COL13A1-213ENST00000520267 NSUN4Q96CB9 384 aaKnown RBP29.82■■■□□ 2.36
COL13A1-213ENST00000520267 R3HCC1Q9Y3T6 440 aaKnown RBP29.82■■■□□ 2.36
COL13A1-213ENST00000520267 HIBADHP31937 336 aaKnown RBP29.82■■■□□ 2.36
COL13A1-213ENST00000520267 SEC23AQ15436 765 aa29.82■■■□□ 2.36
COL13A1-213ENST00000520267 ESR2Q92731 530 aa29.82■■■□□ 2.36
COL13A1-213ENST00000520267 BRIP1Q9BX63 1249 aa29.82■■■□□ 2.36
COL13A1-213ENST00000520267 GOLGA6L6A8MZA4 724 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 CMA1P23946 247 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 PTPAQ15257 358 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 CMTR1Q8N1G2 835 aaKnown RBP29.81■■■□□ 2.36
COL13A1-213ENST00000520267 MAP3K14Q99558 947 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 ANO10Q9NW15 660 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 DUOX1Q9NRD9 1551 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 TNRC6CQ9HCJ0 1690 aaKnown RBP29.81■■■□□ 2.36
COL13A1-213ENST00000520267 MROH7-TTC4A0A0A0MT08 1334 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 TNKSO95271 1327 aa29.81■■■□□ 2.36
COL13A1-213ENST00000520267 MECOMQ03112 1051 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 C17orf53Q8N3J3 647 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms