RNA–Protein interactions for RNA: ENST00000520178.3

CNOT7-208, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 5

Gene CNOT7, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-208	ENST00000520178	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	FLII	Q13045	1269 aa		13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	FAM110C	Q1W6H9	321 aa		13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	TAF7L	Q5H9L4	462 aa		13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	LMBR1L	Q6UX01	489 aa		13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	SYMPK	Q92797	1274 aa	Known RBP	13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	ZNF594	Q96JF6	807 aa	Predicted RBP	13.71	□□□□□ -0.21
CNOT7-208	ENST00000520178	SLC4A2	P04920	1241 aa		13.7	□□□□□ -0.22
CNOT7-208	ENST00000520178	COL6A1	P12109	1028 aa		13.7	□□□□□ -0.22
CNOT7-208	ENST00000520178	VPS37D	Q86XT2	251 aa		13.7	□□□□□ -0.22
CNOT7-208	ENST00000520178	AFG3L2	Q9Y4W6	797 aa		13.7	□□□□□ -0.22
CNOT7-208	ENST00000520178	ATRNL1	Q5VV63	1379 aa		13.7	□□□□□ -0.22
CNOT7-208	ENST00000520178	ZNF697	Q5TEC3	545 aa		13.69	□□□□□ -0.22
CNOT7-208	ENST00000520178	SCYL3	Q8IZE3	742 aa		13.69	□□□□□ -0.22
CNOT7-208	ENST00000520178	TAOK2	Q9UL54	1235 aa		13.69	□□□□□ -0.22
CNOT7-208	ENST00000520178	ZHX2	Q9Y6X8	837 aa		13.69	□□□□□ -0.22
CNOT7-208	ENST00000520178	MROH5	Q6ZUA9	1318 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	PHF20L1	A8MW92	1017 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	PTPRA	P18433	802 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	COL9A1	P20849	921 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	CHAF1A	Q13111	956 aa	Predicted RBP	13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	FKBP5	Q13451	457 aa	Predicted RBP	13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	CAVIN4	Q5BKX8	364 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	EPHA10	Q5JZY3	1008 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	MAP3K21	Q5TCX8	1036 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	ANKRD13C	Q8N6S4	541 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	MAFA	Q8NHW3	353 aa	Predicted RBP	13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	PICK1	Q9NRD5	415 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	GJD2	Q9UKL4	321 aa		13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.68	□□□□□ -0.22
CNOT7-208	ENST00000520178	KIF16B	Q96L93	1317 aa		13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	APAF1	O14727	1248 aa		13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	FRAT2	O75474	233 aa	Predicted RBP	13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	TWISTNB	Q3B726	338 aa	Predicted RBP	13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	GADL1	Q6ZQY3	521 aa		13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	CDX2	Q99626	313 aa	Predicted RBP	13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	PNMA3	Q9UL41	463 aa		13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	AGTPBP1	Q9UPW5	1226 aa		13.67	□□□□□ -0.22
CNOT7-208	ENST00000520178	GCLC	P48506	637 aa	Predicted RBP	13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	MDM2	Q00987	491 aa	Predicted RBP	13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	MAP3K10	Q02779	954 aa		13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	TCP10	Q12799	353 aa		13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	FAM161B	Q96MY7	647 aa		13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	FAM198A	Q9UFP1	575 aa		13.66	□□□□□ -0.22
CNOT7-208	ENST00000520178	GRM8	O00222	908 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	NFIA	Q12857	509 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	TRIM32	Q13049	653 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	BEND3	Q5T5X7	828 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	CDC42EP5	Q6NZY7	148 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	PUS3	Q9BZE2	481 aa	Known RBP	13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	DAGLA	Q9Y4D2	1042 aa		13.65	□□□□□ -0.22
CNOT7-208	ENST00000520178	CTNND1	O60716	968 aa	Known RBP	13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	XRCC5	P13010	732 aa	Known RBP	13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	LRRC26	Q2I0M4	334 aa		13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	VGLL2	Q8N8G2	317 aa		13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	TRIB2	Q92519	343 aa		13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	TSR2	Q969E8	191 aa	Known RBP	13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.64	□□□□□ -0.23
CNOT7-208	ENST00000520178	RFX7	Q2KHR2	1363 aa		13.63	□□□□□ -0.23
CNOT7-208	ENST00000520178	PRKAR2A	P13861	404 aa	Known RBP	13.63	□□□□□ -0.23
CNOT7-208	ENST00000520178	PLA2G5	P39877	138 aa		13.63	□□□□□ -0.23
CNOT7-208	ENST00000520178	WDR66	Q8TBY9	1149 aa		13.63	□□□□□ -0.23
CNOT7-208	ENST00000520178	SEMA6B	Q9H3T3	888 aa		13.63	□□□□□ -0.23
CNOT7-208	ENST00000520178	PIEZO1	Q92508	2521 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	CDK5RAP2	Q96SN8	1893 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	TRIM75P	A6NK02	468 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	TNFRSF10A	O00220	468 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	ENTPD3	O75355	529 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	PDE8B	O95263	885 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	TREML2	Q5T2D2	321 aa		13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	TRMT44	Q8IYL2	757 aa	Known RBP	13.62	□□□□□ -0.23
CNOT7-208	ENST00000520178	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	TJAP1	Q5JTD0	557 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	LHX8	Q68G74	356 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	ZFPM1	Q8IX07	1006 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	SOCS4	Q8WXH5	440 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	IDI2	Q9BXS1	227 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	MORF4L1	Q9UBU8	362 aa		13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	LRRFIP2	Q9Y608	721 aa	Known RBP	13.61	□□□□□ -0.23
CNOT7-208	ENST00000520178	SMAD3	P84022	425 aa	Known RBP	13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	DIXDC1	Q155Q3	683 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	METTL24	Q5JXM2	366 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	KAZALD1	Q96I82	304 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	TBC1D2	Q9BYX2	928 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	USP40	Q9NVE5	1235 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	SIPA1L1	O43166	1804 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	FOCAD	Q5VW36	1801 aa		13.6	□□□□□ -0.23
CNOT7-208	ENST00000520178	TMEM265	A0A087WTH1	108 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178		F6X3S4	739 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	ALDH1L1	O75891	902 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	FOSL2	P15408	326 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	FGFR2	P21802	821 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	RGS3	P49796	1198 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	MYLIP	Q8WY64	445 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	NUDT12	Q9BQG2	462 aa		13.59	□□□□□ -0.23
CNOT7-208	ENST00000520178	TTYH1	Q9H313	450 aa	Predicted RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms