RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SEC31BQ9NQW1 1179 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 HYPKQ9NX55 129 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 SRRDQ9UH36 339 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 LEMD3Q9Y2U8 911 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 CSADQ9Y600 493 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 SOX1O00570 391 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 USP2O75604 605 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 PCCAP05165 728 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 CETPP11597 493 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 GRK4P32298 578 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 FKBP1AP62942 108 aaKnown RBP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 LRIT3Q3SXY7 679 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDCBP-207ENST00000520168 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 RIPOR2Q9Y4F9 1068 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
SDCBP-207ENST00000520168 FAM205AQ6ZU69 1335 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 SGPL1O95470 568 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 CCL5P13501 91 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 MTFR1Q15390 333 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 RTL5Q5HYW3 569 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-207ENST00000520168 NBPF12Q5TAG4 269 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-207ENST00000520168 HDGFL1Q5TGJ6 251 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 U2AF1L4Q8WU68 220 aaKnown RBP6.31□□□□□ -1.4
SDCBP-207ENST00000520168 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 ANKRD2Q9GZV1 360 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 ELP3Q9H9T3 547 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 PRDM6Q9NQX0 595 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 MINPP1Q9UNW1 487 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 FZD1Q9UP38 647 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 CACNA1FO60840 1977 aa6.31□□□□□ -1.4
SDCBP-207ENST00000520168 DDX60LQ5H9U9 1706 aaKnown RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 MYPNQ86TC9 1320 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 ADGRA2Q96PE1 1338 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 SPDYE5A6NIY4 337 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 IGHMBP2P38935 993 aaKnown RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 SLC19A1P41440 591 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 PSMC4P43686 418 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 TNNI2P48788 182 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 CTSWP56202 376 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 GTF2IP78347 998 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 SNAPC2Q13487 334 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 VGLL4Q14135 290 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 RASA3Q14644 834 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 CFAP100Q494V2 611 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 FAM109BQ6ICB4 259 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 RIC3Q7Z5B4 369 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 ERO1BQ86YB8 467 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 TDHQ8IZJ6 230 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 FAM43AQ8N2R8 423 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 ANKLE1Q8NAG6 615 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 GDF15Q99988 308 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 MXD3Q9BW11 206 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 ARHGAP39Q9C0H5 1083 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 VEZTQ9HBM0 779 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 MTMR10Q9NXD2 777 aa6.3□□□□□ -1.4
SDCBP-207ENST00000520168 CWC25Q9NXE8 425 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-207ENST00000520168 AK9Q5TCS8 1911 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 MYH13Q9UKX3 1938 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 FMNL1O95466 1100 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-207ENST00000520168 DDX58O95786 925 aaKnown RBP6.29□□□□□ -1.4
SDCBP-207ENST00000520168 DNAJB2P25686 324 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 KCNJ4P48050 445 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 RIPK4P57078 832 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 PPIL2Q13356 520 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 C17orf99Q6UX52 265 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-207ENST00000520168 NECAB2Q7Z6G3 386 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 SYMPKQ92797 1274 aaKnown RBP6.29□□□□□ -1.4
SDCBP-207ENST00000520168 CD209Q9NNX6 404 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 PTPRFP10586 1907 aa6.29□□□□□ -1.4
SDCBP-207ENST00000520168 COL2A1P02458 1487 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-207ENST00000520168 RPTORQ8N122 1335 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 BTBD19C9JJ37 291 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 CHL1O00533 1208 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDCBP-207ENST00000520168 FCGRTP55899 365 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 PPATQ06203 517 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 BLOC1S3Q6QNY0 202 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 C15orf52Q6ZUT6 534 aaKnown RBP6.28□□□□□ -1.4
SDCBP-207ENST00000520168 ZNF804AQ7Z570 1209 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 ANKRD23Q86SG2 305 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 TTLL11Q8NHH1 800 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 ZNF428Q96B54 188 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 PRMT6Q96LA8 375 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-207ENST00000520168 MPHOSPH8Q99549 860 aa6.28□□□□□ -1.4
SDCBP-207ENST00000520168 MYD88Q99836 296 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms