RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 C12orf50Q8NA57 414 aaPredicted RBP8.7□□□□□ -1.02
NPM1-206ENST00000519955 NT5C1AQ9BXI3 368 aa8.7□□□□□ -1.02
NPM1-206ENST00000519955 FAM221AA4D161 298 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
NPM1-206ENST00000519955 CILPO75339 1184 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 BPNT1O95861 308 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
NPM1-206ENST00000519955 ZC3H12AQ5D1E8 599 aaKnown RBP8.69□□□□□ -1.02
NPM1-206ENST00000519955 HDXQ7Z353 690 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 ACBD3Q9H3P7 528 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 AP4E1Q9UPM8 1137 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
NPM1-206ENST00000519955 TMPRSS2O15393 492 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 IGHA1P01876 353 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 ZC3H6P61129 1189 aaKnown RBP8.68□□□□□ -1.02
NPM1-206ENST00000519955 ERVK-24P63145 666 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 MPP2Q14168 576 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 UVSSAQ2YD98 709 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
NPM1-206ENST00000519955 ELMO3Q96BJ8 720 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 LRRC3Q9BY71 257 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
NPM1-206ENST00000519955 DRD2P14416 443 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 PAK2Q13177 524 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
NPM1-206ENST00000519955 LRFN4Q6PJG9 635 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
NPM1-206ENST00000519955 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 EAF1Q96JC9 268 aaPredicted RBP8.67□□□□□ -1.02
NPM1-206ENST00000519955 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 INPP5FQ9Y2H2 1132 aa8.67□□□□□ -1.02
NPM1-206ENST00000519955 GAS2O43903 313 aaKnown RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 GATA4P43694 442 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 PREPP48147 710 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 GJA8P48165 433 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 APOBRQ0VD83 1088 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 GNL2Q13823 731 aaKnown RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 CWF19L2Q2TBE0 894 aaKnown RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 DYMQ7RTS9 669 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 C2CD4AQ8NCU7 369 aaPredicted RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 GPRASP2Q96D09 838 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 FAM46AQ96IP4 442 aaKnown RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 MEGF10Q96KG7 1140 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 C8orf37Q96NL8 207 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 UBL7Q96S82 380 aaPredicted RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
NPM1-206ENST00000519955 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
NPM1-206ENST00000519955 DCDC2CA8MYV0 355 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 GFRA2O00451 464 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 INPP5AQ14642 412 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 PLA2G4EQ3MJ16 856 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 CAPN10Q9HC96 672 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 UBP1Q9NZI7 540 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
NPM1-206ENST00000519955 ASPAP45381 313 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 CRKP46108 304 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 RING1Q06587 406 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.64□□□□□ -1.03
NPM1-206ENST00000519955 REC114Q7Z4M0 266 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 C12orf40Q86WS4 652 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 FBXO27Q8NI29 283 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 RASGRP4Q8TDF6 673 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 NKD1Q969G9 470 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
NPM1-206ENST00000519955 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
NPM1-206ENST00000519955 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 DISC1Q9NRI5 854 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 ACTL7BQ9Y614 415 aa8.64□□□□□ -1.03
NPM1-206ENST00000519955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.63□□□□□ -1.03
NPM1-206ENST00000519955 FANCGO15287 622 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 TLR3O15455 904 aaKnown RBP8.63□□□□□ -1.03
NPM1-206ENST00000519955 TNNI2P48788 182 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 CDK8P49336 464 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 USP11P51784 963 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 RNF214Q8ND24 703 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 MYRFLQ96LU7 910 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 TINF2Q9BSI4 451 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 PIDD1Q9HB75 910 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 CSADQ9Y600 493 aa8.63□□□□□ -1.03
NPM1-206ENST00000519955 PRAMEF27A3QJZ7 478 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 PDE4BQ07343 736 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 COL9A2Q14055 689 aaPredicted RBP8.62□□□□□ -1.03
NPM1-206ENST00000519955 PPM1JQ5JR12 505 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
NPM1-206ENST00000519955 ITGB2P05107 769 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 TTLL4Q14679 1199 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 SEZ6Q53EL9 994 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 NAALADL2Q58DX5 795 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 ZBTB37Q5TC79 503 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 VPS37DQ86XT2 251 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 REXO1Q8N1G1 1221 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms