RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PICALMQ13492 652 aa13.4□□□□□ -0.26
PVT1-208ENST00000519481 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
PVT1-208ENST00000519481 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
PVT1-208ENST00000519481 ZFPM1Q8IX07 1006 aa13.4□□□□□ -0.26
PVT1-208ENST00000519481 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
PVT1-208ENST00000519481 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
PVT1-208ENST00000519481 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
PVT1-208ENST00000519481 UQCRFS1P1P0C7P4 283 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 MECOMQ03112 1051 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
PVT1-208ENST00000519481 C17orf99Q6UX52 265 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 FASTKD5Q7L8L6 764 aaKnown RBP13.39□□□□□ -0.27
PVT1-208ENST00000519481 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 ZNF333Q96JL9 665 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 PARK7Q99497 189 aaKnown RBP13.39□□□□□ -0.27
PVT1-208ENST00000519481 RAI14Q9P0K7 980 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 CPA4Q9UI42 421 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 ZHX2Q9Y6X8 837 aa13.39□□□□□ -0.27
PVT1-208ENST00000519481 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
PVT1-208ENST00000519481 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
PVT1-208ENST00000519481 CAP1Q01518 475 aa13.38□□□□□ -0.27
PVT1-208ENST00000519481 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
PVT1-208ENST00000519481 GCC1Q96CN9 775 aa13.38□□□□□ -0.27
PVT1-208ENST00000519481 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
PVT1-208ENST00000519481 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 PHF20L1A8MW92 1017 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
PVT1-208ENST00000519481 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
PVT1-208ENST00000519481 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
PVT1-208ENST00000519481 PSMC4P43686 418 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
PVT1-208ENST00000519481 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 TMEM57Q8N5G2 664 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 ARHGAP39Q9C0H5 1083 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 TNNQ9UQP3 1299 aa13.37□□□□□ -0.27
PVT1-208ENST00000519481 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
PVT1-208ENST00000519481 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
PVT1-208ENST00000519481 PTPRAP18433 802 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 MAP3K10Q02779 954 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
PVT1-208ENST00000519481 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
PVT1-208ENST00000519481 RFX7Q2KHR2 1363 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 A0A0G2JLL6 359 aaPredicted RBP13.35□□□□□ -0.27
PVT1-208ENST00000519481 TBC1D12O60347 775 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 BAG3O95817 575 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
PVT1-208ENST00000519481 FCGRTP55899 365 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 RHBDL3P58872 404 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 PI16Q6UXB8 463 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 TBC1D9Q6ZT07 1266 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 PRRT2Q7Z6L0 340 aaPredicted RBP13.35□□□□□ -0.27
PVT1-208ENST00000519481 TEX11Q8IYF3 940 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 SH3TC2Q8TF17 1288 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
PVT1-208ENST00000519481 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■■■□ 24.3
PVT1-208ENST00000519481 SRRDQ9UH36 339 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 AFG3L2Q9Y4W6 797 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 HTTP42858 3142 aa13.35□□□□□ -0.27
PVT1-208ENST00000519481 DOCK2Q92608 1830 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 SURF6O75683 361 aaKnown RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 PLCG2P16885 1265 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 OSBPP22059 807 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 MCAMP43121 646 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 MOGSQ13724 837 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 SMCR8Q8TEV9 937 aaPredicted RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 BIN2Q9UBW5 565 aaPredicted RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
PVT1-208ENST00000519481 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
PVT1-208ENST00000519481 TRIM75PA6NK02 468 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 IGSF3O75054 1194 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 CYP2C8P10632 490 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 GRK4P32298 578 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 POLA2Q14181 598 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 SSH3Q8TE77 659 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
PVT1-208ENST00000519481 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
PVT1-208ENST00000519481 BCRP11274 1271 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 UBXN2AP68543 259 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.28
PVT1-208ENST00000519481 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
PVT1-208ENST00000519481 DBNDD2Q9BQY9 259 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms