RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 MEIS3Q99687 375 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
TRIM35-202ENST00000519219 GAKO14976 1311 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 A0A0G2JLL6 359 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-202ENST00000519219 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-202ENST00000519219 GNRH1P01148 92 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 PTPRAP18433 802 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 TIMM10P62072 90 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 ALDH1L2Q3SY69 923 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 PI16Q6UXB8 463 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 GADL1Q6ZQY3 521 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 PRRT2Q7Z6L0 340 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-202ENST00000519219 SCYL3Q8IZE3 742 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 RAET1EQ8TD07 263 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 ZHX2Q9Y6X8 837 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 LOC285556D6RIA3 1793 aa10.89□□□□□ -0.67
TRIM35-202ENST00000519219 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
TRIM35-202ENST00000519219 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 CXCL11O14625 94 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 ELNP15502 786 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 BTDP43251 543 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 PRMT2P55345 433 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 PICALMQ13492 652 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 TRMT2AQ8IZ69 625 aaKnown RBP10.88□□□□□ -0.67
TRIM35-202ENST00000519219 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
TRIM35-202ENST00000519219 IDI2Q9BXS1 227 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 GNL3LQ9NVN8 582 aaKnown RBP10.88□□□□□ -0.67
TRIM35-202ENST00000519219 ABCF2Q9UG63 623 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 TNNQ9UQP3 1299 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 AFG3L2Q9Y4W6 797 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 SZT2Q5T011 3432 aa10.88□□□□□ -0.67
TRIM35-202ENST00000519219 TRIM75PA6NK02 468 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 ENTPD3O75355 529 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 GJB1P08034 283 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 GJA8P48165 433 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 RHBDL3P58872 404 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 TFCP2Q12800 502 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 RRP1BQ14684 758 aaKnown RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 DZIP1Q86YF9 867 aaKnown RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 ZSCAN29Q8IWY8 852 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 DPF3Q92784 378 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
TRIM35-202ENST00000519219 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-202ENST00000519219 MROH7-TTC4A0A0A0MT08 1334 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 SEMA3EO15041 775 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 HOXD10P28358 340 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 FLT3LGP49771 235 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 FCGRTP55899 365 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 MAP3K10Q02779 954 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 MECOMQ03112 1051 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 TREML2Q5T2D2 321 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 TBC1D9Q6ZT07 1266 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 XAGE2Q96GT9 111 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 PICK1Q9NRD5 415 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 FOCADQ5VW36 1801 aa10.86□□□□□ -0.67
TRIM35-202ENST00000519219 ADCY3O60266 1144 aa10.85□□□□□ -0.67
TRIM35-202ENST00000519219 FARP2O94887 1054 aaPredicted RBP10.85□□□□□ -0.67
TRIM35-202ENST00000519219 INHAP05111 366 aa10.85□□□□□ -0.67
TRIM35-202ENST00000519219 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
TRIM35-202ENST00000519219 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
TRIM35-202ENST00000519219 PEX10O60683 326 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 SHROOM1Q2M3G4 852 aaPredicted RBP10.84□□□□□ -0.67
TRIM35-202ENST00000519219 FASTKD5Q7L8L6 764 aaKnown RBP10.84□□□□□ -0.67
TRIM35-202ENST00000519219 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
TRIM35-202ENST00000519219 HMG20BQ9P0W2 317 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
TRIM35-202ENST00000519219 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
TRIM35-202ENST00000519219 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
TRIM35-202ENST00000519219 GPR75-ASB3A0A0A6YYF3 556 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 TNPO2O14787 897 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 ZBTB22O15209 634 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 SRGAP3O43295 1099 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 SGPL1O95470 568 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 RARSP54136 660 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 UBXN2AP68543 259 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 JAG1P78504 1218 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 TRIM32Q13049 653 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 ZGPATQ8N5A5 531 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 DIS3LQ8TF46 1054 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.68
TRIM35-202ENST00000519219 AGTPBP1Q9UPW5 1226 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 SLC45A1Q9Y2W3 748 aa10.83□□□□□ -0.68
TRIM35-202ENST00000519219 PNMA6EA0A0J9YXQ4 647 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms