RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 BRAPQ7Z569 592 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 FBXO18Q8NFZ0 1043 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 C16orf45Q96MC5 204 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 SLC4A9Q96Q91 983 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 DNAJC25Q9H1X3 360 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 YEATS4O95619 227 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 CDC25BP30305 580 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 ME1P48163 572 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 FOSBP53539 338 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 TRDNQ13061 729 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 SPC24Q8NBT2 197 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 SECISBP2LQ93073 1101 aaKnown RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 POLR3EQ9NVU0 708 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 ORC3Q9UBD5 711 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
SH2D4A-204ENST00000519207 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 CPLX1O14810 134 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 PSEN1P49768 467 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 IQCB1Q15051 598 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 NOL10Q9BSC4 688 aaKnown RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ST7Q9NRC1 585 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ZMYM6O95789 1325 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 PUM3Q15397 648 aaKnown RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ALX1Q15699 326 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 GPR162Q16538 588 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 LINC00301Q8NCQ3 95 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 LPIN2Q92539 896 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 ANGEL1Q9UNK9 670 aaKnown RBP11.67□□□□□ -0.54
SH2D4A-204ENST00000519207 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 FGFR2P21802 821 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 LRMPQ12912 555 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 CEP135Q66GS9 1140 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 FMR1NBQ8N0W7 255 aaPredicted RBP11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 NLGN2Q8NFZ4 835 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 L2HGDHQ9H9P8 463 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 PIH1D3Q9NQM4 214 aaKnown RBP11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
SH2D4A-204ENST00000519207 TCRBV5S4A2TA0A5A2 114 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 CDKL5O76039 1030 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 PDE6AP16499 860 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 TMEM87BQ96K49 555 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 UBN2Q6ZU65 1347 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
SH2D4A-204ENST00000519207 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 PHKA1P46020 1223 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 PLA2G4AP47712 749 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 STK38Q15208 465 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 MSL1Q68DK7 614 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 AMIGO3Q86WK7 504 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 MRFAP1L1Q96HT8 127 aa11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.55
SH2D4A-204ENST00000519207 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 SPTLC2O15270 562 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 SLC5A1P13866 664 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 SF3A1Q15459 793 aaKnown RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 C11orf57Q6ZUT1 292 aaPredicted RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 CACTINQ8WUQ7 758 aaKnown RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 DOCK2Q92608 1830 aa11.64□□□□□ -0.55
SH2D4A-204ENST00000519207 NEMFO60524 1076 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms