RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ANKS3Q6ZW76 656 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 JAZF1Q86VZ6 243 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 CCDC155Q8N6L0 562 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 TRPM4Q8TD43 1214 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 NKD1Q969G9 470 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 GTPBP3Q969Y2 492 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RBSNQ9H1K0 784 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RASSF4Q9H2L5 321 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 R3HCC1Q9Y3T6 440 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RIMBP3CA6NJZ7 1639 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RIMBP3BA6NNM3 1639 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RIMBP3Q9UFD9 1639 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 PPRC1Q5VV67 1664 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 SPHKAPQ2M3C7 1700 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 MADDQ8WXG6 1647 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 MAP3K4Q9Y6R4 1608 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 J3QW42 95 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 PAGE1O75459 146 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 RGS20O76081 388 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 ETFBP38117 255 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 CRKP46108 304 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 SIK1P57059 783 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 FAM182BQ5T319 152 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 FAM196AQ6ZSG2 479 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 HNRNPLLQ8WVV9 542 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 GMCL1Q96IK5 515 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 UBE2OQ9C0C9 1292 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 IGFLR1Q9H665 355 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 SAMM50Q9Y512 469 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 GLI2P10070 1586 aa6.48□□□□□ -1.37
CTNNA1-212ENST00000518919 ROCK2O75116 1388 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 TLR3O15455 904 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 SMNDC1O75940 238 aaKnown RBP eCLIP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 SEZ6Q53EL9 994 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF662Q6ZS27 426 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 TRIM42Q8IWZ5 723 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 ANKRD13AQ8IZ07 590 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 DCAF11Q8TEB1 546 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 MUC3BQ9H195 1237 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 SIRPGQ9P1W8 387 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 PRKAG3Q9UGI9 489 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 PRR12Q9ULL5 1215 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 NEURL4Q96JN8 1562 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 UGGT1Q9NYU2 1555 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 DIP2CQ9Y2E4 1556 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 CEP152O94986 1710 aa6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 COL17A1Q9UMD9 1497 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-212ENST00000518919 ST8SIA5O15466 376 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 ITGA6P23229 1130 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 RAB33AQ14088 237 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 PCSK7Q16549 785 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 BNC2Q6ZN30 1099 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 SLITRK4Q8IW52 837 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 MKL1Q969V6 931 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 TRERF1Q96PN7 1200 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 CARD11Q9BXL7 1154 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 LRRC3Q9BY71 257 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 DNAJB12Q9NXW2 375 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 PPT2Q9UMR5 302 aa6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-212ENST00000518919 ABCC3O15438 1527 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 KANK1Q14678 1352 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 DIP2BQ9P265 1576 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 ZBTB42B2RXF5 422 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 KIF3BO15066 747 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 KLF4O43474 513 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 F13A1P00488 732 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 PCDH1Q08174 1060 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 CWF19L2Q2TBE0 894 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 CEP135Q66GS9 1140 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 FBXO27Q8NI29 283 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 BSNDQ8WZ55 320 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 FERD3LQ96RJ6 166 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 PCDHB5Q9Y5E4 795 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 ADGRB3O60242 1522 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 RICTORQ6R327 1708 aa6.45□□□□□ -1.38
CTNNA1-212ENST00000518919 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 SMAD7O15105 426 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 GFRA3O60609 400 aa6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 BPNT1O95861 308 aa6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 B3GALT4O96024 378 aa6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 PTPRAP18433 802 aa6.44□□□□□ -1.38
CTNNA1-212ENST00000518919 MCM4P33991 863 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms