RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 LMOD1P29536 600 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 TTF1Q15361 905 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 STK11IPQ8N1F8 1099 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 SPATA5Q8NB90 893 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 RGS22Q8NE09 1264 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 ARMT1Q9H993 441 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 ZNF215Q9UL58 517 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 TIAM2Q8IVF5 1701 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 CHD4Q14839 1912 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 WTIPA6NIX2 430 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 PDE4BQ07343 736 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 ALX1Q15699 326 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 SPECC1Q5M775 1068 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 TMC6Q7Z403 805 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 MAGEB6Q8N7X4 407 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 LRRN4CLQ8ND94 238 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 CCDC112Q8NEF3 446 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 LPIN2Q92539 896 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 TIGD1Q96MW7 591 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 BCORQ6W2J9 1755 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 MBD4O95243 580 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 SYKP43405 635 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 TRDNQ13061 729 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 PUM3Q15397 648 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 PTPN14Q15678 1187 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 SUSD4Q5VX71 490 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 CMTR1Q8N1G2 835 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 INTS13Q9NVM9 706 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 IMPACTQ9P2X3 320 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 V9GYY5 206 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 ZBTB43O43298 467 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 SMC2O95347 1197 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 ADGRA1Q86SQ6 560 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 BTBD18B2RXH4 712 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 LIFRP42702 1097 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 FANCCQ00597 558 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 TMEM67Q5HYA8 995 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 DZIP3Q86Y13 1208 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
CTNNA1-210ENST00000518825 NID2Q14112 1375 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 IKBKBO14920 756 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 IARSP41252 1262 aaKnown RBP9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 BCAMP50895 628 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 MED15Q96RN5 788 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 KCNJ14Q9UNX9 436 aa9.77□□□□□ -0.84
CTNNA1-210ENST00000518825 BCL9LQ86UU0 1499 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 GOLGA8AA7E2F4 631 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 TMEM232C9JQI7 657 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 GSDMDP57764 484 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 INTS5Q6P9B9 1019 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 TMX1Q9H3N1 280 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 PCDHA5Q9Y5H7 936 aa9.77□□□□□ -0.85
CTNNA1-210ENST00000518825 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 AKNAD1Q5T1N1 836 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 IFIT3O14879 490 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 CDKL5O76039 1030 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 MMP1P03956 469 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 IFNAR1P17181 557 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 IL6STP40189 918 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 NR5A1Q13285 461 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 CCDC93Q567U6 631 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 KRBA2Q6ZNG9 492 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 TMEM139Q8IV31 216 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 STK36Q9NRP7 1315 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 DMTNQ08495 405 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 USP49Q70CQ1 688 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 CCDC82Q8N4S0 544 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 FANCLQ9NW38 375 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 FBXO2Q9UK22 296 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 KCNH3Q9ULD8 1083 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
CTNNA1-210ENST00000518825 MIGA1Q8NAN2 632 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 STAG1Q8WVM7 1258 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 NAPBQ9H115 298 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 L2HGDHQ9H9P8 463 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 PCDHB6Q9Y5E3 794 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 PHLPP1O60346 1717 aa9.75□□□□□ -0.85
CTNNA1-210ENST00000518825 CUTAO60888 179 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms