RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 MAP2K2P36507 400 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 SCNN1DP51172 638 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 CRY2Q49AN0 593 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 SLCO4C1Q6ZQN7 724 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 SYNE4Q8N205 404 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 GPR101Q96P66 508 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-207ENST00000518716 GGA1Q9UJY5 639 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 CASP8AP2Q9UKL3 1982 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 EPS15P42566 896 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 CLN3Q13286 438 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 CYP4F22Q6NT55 531 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 TTC5Q8N0Z6 440 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
PABPC1-207ENST00000518716 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
PABPC1-207ENST00000518716 PIK3R2O00459 728 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 TRAF5O00463 557 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-207ENST00000518716 ECE1P42892 770 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 SAPCD2Q86UD0 394 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-207ENST00000518716 HHIPL1Q96JK4 782 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 FMNL2Q96PY5 1086 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 MCOLN1Q9GZU1 580 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 PHF24Q9UPV7 400 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 TRPM7Q96QT4 1865 aa8.11□□□□□ -1.11
PABPC1-207ENST00000518716 PRAMEF22A3QJZ6 481 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 CA12O43570 354 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 AOC2O75106 756 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 HSPA5P11021 654 aaKnown RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 EPXP11678 715 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 ALDH1B1P30837 517 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 RSPO4Q2I0M5 234 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 USP50Q70EL3 339 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 NOP53Q9NZM5 478 aaKnown RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 KNSTRNQ9Y448 316 aa8.1□□□□□ -1.11
PABPC1-207ENST00000518716 COL3A1P02461 1466 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-207ENST00000518716 BMP4P12644 408 aa8.09□□□□□ -1.11
PABPC1-207ENST00000518716 PIP4K2AP48426 406 aaPredicted RBP8.09□□□□□ -1.11
PABPC1-207ENST00000518716 BRPF1P55201 1214 aaPredicted RBP8.09□□□□□ -1.11
PABPC1-207ENST00000518716 TEFQ10587 303 aa8.09□□□□□ -1.11
PABPC1-207ENST00000518716 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
PABPC1-207ENST00000518716 HLFQ16534 295 aa8.09□□□□□ -1.11
PABPC1-207ENST00000518716 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
PABPC1-207ENST00000518716 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
PABPC1-207ENST00000518716 EIF4G2P78344 907 aaKnown RBP eCLIP8.08□□□□□ -1.12
PABPC1-207ENST00000518716 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-207ENST00000518716 GPRC5DQ9NZD1 345 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 NIP7Q9Y221 180 aaKnown RBP eCLIP8.08□□□□□ -1.12
PABPC1-207ENST00000518716 ZNF652Q9Y2D9 606 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 RIC1Q4ADV7 1423 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 ABCC12Q96J65 1359 aa8.08□□□□□ -1.12
PABPC1-207ENST00000518716 KIF7Q2M1P5 1343 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 NPHP1O15259 732 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 SNRPA1P09661 255 aaKnown RBP8.07□□□□□ -1.12
PABPC1-207ENST00000518716 GATA4P43694 442 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 HIRAP54198 1017 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-207ENST00000518716 CTBSQ01459 385 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ABHD17AQ96GS6 310 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ARHGEF10LQ9HCE6 1279 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ZFP64Q9NPA5 681 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ADARB2Q9NS39 739 aaKnown RBP8.07□□□□□ -1.12
PABPC1-207ENST00000518716 GJA3Q9Y6H8 435 aa8.07□□□□□ -1.12
PABPC1-207ENST00000518716 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 CELF2O95319 508 aaKnown RBP8.06□□□□□ -1.12
PABPC1-207ENST00000518716 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-207ENST00000518716 SCTRP47872 440 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 PDE4DQ08499 809 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 RNF135Q8IUD6 432 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 CRAMP1Q96RY5 1269 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 RTFDC1Q9BY42 306 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-207ENST00000518716 VPS33BQ9H267 617 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
PABPC1-207ENST00000518716 ATXN7L1Q9ULK2 861 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-207ENST00000518716 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-207ENST00000518716 FGFR3P22607 806 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 PHKA2P46019 1235 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 CXCL9Q07325 125 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 CIAPIN1Q6FI81 312 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms