RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-202ENST00000518271 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
MRPS28-202ENST00000518271 ZNF112Q9UJU3 913 aa15.01□□□□□ -0.01
MRPS28-202ENST00000518271 DDTLA6NHG4 134 aaPredicted RBP15□□□□□ -0.01
MRPS28-202ENST00000518271 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
MRPS28-202ENST00000518271 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 SLF2Q8IX21 1173 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 BRI3BPQ8WY22 251 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 RAI14Q9P0K7 980 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 NDUFB9Q9Y6M9 179 aa15□□□□□ -0.01
MRPS28-202ENST00000518271 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 GPR25O00155 361 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 MAP3K10Q02779 954 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 DGKZQ13574 1117 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 DCAF15Q66K64 600 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 AACSQ86V21 672 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 ZNF296Q8WUU4 475 aaPredicted RBP14.99□□□□□ -0.01
MRPS28-202ENST00000518271 HOOK2Q96ED9 719 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 CSADQ9Y600 493 aa14.99□□□□□ -0.01
MRPS28-202ENST00000518271 PHF20L1A8MW92 1017 aa14.98□□□□□ -0.01
MRPS28-202ENST00000518271 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
MRPS28-202ENST00000518271 INHBEP58166 350 aa14.98□□□□□ -0.01
MRPS28-202ENST00000518271 NOL9Q5SY16 702 aaKnown RBP14.98□□□□□ -0.01
MRPS28-202ENST00000518271 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
MRPS28-202ENST00000518271 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
MRPS28-202ENST00000518271 IRF6O14896 467 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 GSTO1P78417 241 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 PPIL2Q13356 520 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 PICALMQ13492 652 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
MRPS28-202ENST00000518271 KIF1BPQ96EK5 621 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 ANTXR1Q9H6X2 564 aa14.97□□□□□ -0.01
MRPS28-202ENST00000518271 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 APBB1O00213 710 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 HMMRO75330 724 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 ALDH1A1P00352 501 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 LDHCP07864 332 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 PPP4CP60510 307 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 CAP1Q01518 475 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 CRHR2Q13324 411 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 MOGSQ13724 837 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 CCL15Q16663 113 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.01
MRPS28-202ENST00000518271 CTU1Q7Z7A3 348 aaKnown RBP14.96□□□□□ -0.01
MRPS28-202ENST00000518271 FAM43AQ8N2R8 423 aa14.96□□□□□ -0.01
MRPS28-202ENST00000518271 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
MRPS28-202ENST00000518271 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
MRPS28-202ENST00000518271 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
MRPS28-202ENST00000518271 GTF2A2P52657 109 aa14.95□□□□□ -0.02
MRPS28-202ENST00000518271 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
MRPS28-202ENST00000518271 KCNH4Q9UQ05 1017 aa14.95□□□□□ -0.02
MRPS28-202ENST00000518271 FAM196BA6NMK8 535 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 IGSF3O75054 1194 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 PPATQ06203 517 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
MRPS28-202ENST00000518271 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-202ENST00000518271 MGAMO43451 1857 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 BRCA2P51587 3418 aa14.94□□□□□ -0.02
MRPS28-202ENST00000518271 BTBD19C9JJ37 291 aa14.93□□□□□ -0.02
MRPS28-202ENST00000518271 FKTNO75072 461 aa14.93□□□□□ -0.02
MRPS28-202ENST00000518271 RAB11FIP3O75154 756 aa14.93□□□□□ -0.02
MRPS28-202ENST00000518271 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
MRPS28-202ENST00000518271 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
MRPS28-202ENST00000518271 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
MRPS28-202ENST00000518271 SCYL3Q8IZE3 742 aa14.93□□□□□ -0.02
MRPS28-202ENST00000518271 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
MRPS28-202ENST00000518271 FLT1P17948 1338 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 TBC1D12O60347 775 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 IDH1O75874 414 aaKnown RBP14.92□□□□□ -0.02
MRPS28-202ENST00000518271 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
MRPS28-202ENST00000518271 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
MRPS28-202ENST00000518271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
MRPS28-202ENST00000518271 DNAJC18Q9H819 358 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 RBBP6Q7Z6E9 1792 aaKnown RBP14.92□□□□□ -0.02
MRPS28-202ENST00000518271 MYH8P13535 1937 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
MRPS28-202ENST00000518271 MKI67P46013 3256 aaKnown RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 CETPP11597 493 aa14.91□□□□□ -0.02
MRPS28-202ENST00000518271 PTPRAP18433 802 aa14.91□□□□□ -0.02
MRPS28-202ENST00000518271 CYP7A1P22680 504 aa14.91□□□□□ -0.02
MRPS28-202ENST00000518271 CCDC84Q86UT8 332 aaPredicted RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 MAGEB6Q8N7X4 407 aa14.91□□□□□ -0.02
MRPS28-202ENST00000518271 EDC3Q96F86 508 aaKnown RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 ZCCHC17Q9NP64 241 aaKnown RBP14.91□□□□□ -0.02
MRPS28-202ENST00000518271 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
MRPS28-202ENST00000518271 BAG3O95817 575 aa14.9□□□□□ -0.02
MRPS28-202ENST00000518271 PLCG2P16885 1265 aa14.9□□□□□ -0.02
MRPS28-202ENST00000518271 TAF1CQ15572 869 aaPredicted RBP14.9□□□□□ -0.02
MRPS28-202ENST00000518271 OTUD7BQ6GQQ9 843 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms