RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 LY9Q9HBG7 655 aa27.47■■□□□ 1.99
SLIT3-204ENST00000518140 MKRN1Q9UHC7 482 aaKnown RBP27.47■■□□□ 1.99
SLIT3-204ENST00000518140 IGSF3O75054 1194 aa27.46■■□□□ 1.99
SLIT3-204ENST00000518140 TMEM67Q5HYA8 995 aa27.46■■□□□ 1.99
SLIT3-204ENST00000518140 EYA3Q99504 573 aa27.46■■□□□ 1.99
SLIT3-204ENST00000518140 GOLGA8BA8MQT2 603 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 C21orf2O43822 256 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 PRDM1O75626 825 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 USP17L8P0C7I0 530 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 BTDP43251 543 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 TMEM87BQ96K49 555 aa27.45■■□□□ 1.99
SLIT3-204ENST00000518140 LLPHQ9BRT6 129 aaKnown RBP27.45■■□□□ 1.99
SLIT3-204ENST00000518140 VPS37CA5D8V6 355 aaPredicted RBP27.45■■□□□ 1.98
SLIT3-204ENST00000518140 F8W031 263 aaPredicted RBP27.45■■□□□ 1.98
SLIT3-204ENST00000518140 G3V3G9 751 aa27.45■■□□□ 1.98
SLIT3-204ENST00000518140 IFIT3O14879 490 aaKnown RBP27.45■■□□□ 1.98
SLIT3-204ENST00000518140 KCNA3P22001 575 aa27.45■■□□□ 1.98
SLIT3-204ENST00000518140 DCAF8Q5TAQ9 597 aa27.45■■□□□ 1.98
SLIT3-204ENST00000518140 RNF41Q9H4P4 317 aaPredicted RBP27.45■■□□□ 1.98
SLIT3-204ENST00000518140 GPR75-ASB3A0A0A6YYF3 556 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 BAG3O95817 575 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 MCM9Q9NXL9 1143 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 ATF5Q9Y2D1 282 aaPredicted RBP27.44■■□□□ 1.98
SLIT3-204ENST00000518140 MYH2Q9UKX2 1941 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 PTPDC1A2A3K4 754 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 F13A1P00488 732 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 DPEP1P16444 411 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 RXRAP19793 462 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 TGFBRAP1Q8WUH2 860 aa27.44■■□□□ 1.98
SLIT3-204ENST00000518140 USP5P45974 858 aa27.43■■□□□ 1.98
SLIT3-204ENST00000518140 L1TD1Q5T7N2 865 aaKnown RBP27.43■■□□□ 1.98
SLIT3-204ENST00000518140 CDC37L1Q7L3B6 337 aa27.43■■□□□ 1.98
SLIT3-204ENST00000518140 LMBRD1Q9NUN5 540 aa27.43■■□□□ 1.98
SLIT3-204ENST00000518140 FAM163AQ96GL9 167 aaPredicted RBP27.42■■□□□ 1.98
SLIT3-204ENST00000518140 SNED1Q8TER0 1413 aa27.42■■□□□ 1.98
SLIT3-204ENST00000518140 GOLGA6L22H0YM25 854 aa27.42■■□□□ 1.98
SLIT3-204ENST00000518140 PRPF40AO75400 957 aaKnown RBP27.42■■□□□ 1.98
SLIT3-204ENST00000518140 FGRP09769 529 aa27.42■■□□□ 1.98
SLIT3-204ENST00000518140 SBK1Q52WX2 424 aa27.42■■□□□ 1.98
SLIT3-204ENST00000518140 NOL10Q9BSC4 688 aaKnown RBP27.42■■□□□ 1.98
SLIT3-204ENST00000518140 KIAA1551Q9HCM1 1747 aa27.41■■□□□ 1.98
SLIT3-204ENST00000518140 AOC3Q16853 763 aa27.41■■□□□ 1.98
SLIT3-204ENST00000518140 APOA5Q6Q788 366 aa27.41■■□□□ 1.98
SLIT3-204ENST00000518140 MYL10Q9BUA6 226 aa27.41■■□□□ 1.98
SLIT3-204ENST00000518140 GAKO14976 1311 aa27.41■■□□□ 1.98
SLIT3-204ENST00000518140 PDCP20941 246 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 RHBDL3P58872 404 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 NFXL1Q6ZNB6 911 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 MAPKAPK5Q8IW41 473 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 TTLL6Q8N841 843 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 FDPSP14324 419 aaKnown RBP27.4■■□□□ 1.98
SLIT3-204ENST00000518140 LIFRP42702 1097 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 PODNQ7Z5L7 613 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 FERMT3Q86UX7 667 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 SGMS1Q86VZ5 419 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 ARPP21Q9UBL0 812 aaPredicted RBP27.4■■□□□ 1.98
SLIT3-204ENST00000518140 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.4■■□□□ 1.98
SLIT3-204ENST00000518140 DAGLAQ9Y4D2 1042 aa27.4■■□□□ 1.98
SLIT3-204ENST00000518140 ADD1P35611 737 aaKnown RBP27.39■■□□□ 1.98
SLIT3-204ENST00000518140 CCDC144CPQ8IYA2 1237 aa27.39■■□□□ 1.98
SLIT3-204ENST00000518140 ESR2Q92731 530 aa27.39■■□□□ 1.98
SLIT3-204ENST00000518140 GDPD2Q9HCC8 539 aa27.39■■□□□ 1.98
SLIT3-204ENST00000518140 TTF2Q9UNY4 1162 aaKnown RBP27.39■■□□□ 1.98
SLIT3-204ENST00000518140 ECE2O60344 883 aa27.39■■□□□ 1.97
SLIT3-204ENST00000518140 RANBP6O60518 1105 aaKnown RBP27.39■■□□□ 1.97
SLIT3-204ENST00000518140 SCNN1DP51172 638 aa27.39■■□□□ 1.97
SLIT3-204ENST00000518140 FOSBP53539 338 aa27.39■■□□□ 1.97
SLIT3-204ENST00000518140 C12orf60Q5U649 245 aa27.39■■□□□ 1.97
SLIT3-204ENST00000518140 ILDR1Q86SU0 546 aaPredicted RBP27.39■■□□□ 1.97
SLIT3-204ENST00000518140 GZF1Q9H116 711 aaPredicted RBP27.39■■□□□ 1.97
SLIT3-204ENST00000518140 SAP30BPQ9UHR5 308 aaKnown RBP27.39■■□□□ 1.97
SLIT3-204ENST00000518140 CDC27P30260 824 aa27.38■■□□□ 1.97
SLIT3-204ENST00000518140 MICU3Q86XE3 530 aa27.38■■□□□ 1.97
SLIT3-204ENST00000518140 TEX11Q8IYF3 940 aa27.38■■□□□ 1.97
SLIT3-204ENST00000518140 FAM184AQ8NB25 1140 aa27.38■■□□□ 1.97
SLIT3-204ENST00000518140 DYNLL2Q96FJ2 89 aa27.37■■□□□ 1.97
SLIT3-204ENST00000518140 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
SLIT3-204ENST00000518140 SLF2Q8IX21 1173 aa27.37■■□□□ 1.97
SLIT3-204ENST00000518140 FAM217BQ9NTX9 383 aaPredicted RBP27.37■■□□□ 1.97
SLIT3-204ENST00000518140 SUGT1Q9Y2Z0 365 aa27.37■■□□□ 1.97
SLIT3-204ENST00000518140 METAP2P50579 478 aaKnown RBP eCLIP27.36■■□□□ 1.97
SLIT3-204ENST00000518140 PLCD1P51178 756 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 HMGN5P82970 282 aaKnown RBP27.36■■□□□ 1.97
SLIT3-204ENST00000518140 WTAPQ15007 396 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 SEC23AQ15436 765 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 ZBTB43O43298 467 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 FAM47AQ5JRC9 791 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 CC2D2BQ6DHV5 1058 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 FAM173BQ6P4H8 233 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 CNPY2Q9Y2B0 182 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 SLC12A7Q9Y666 1083 aa27.36■■□□□ 1.97
SLIT3-204ENST00000518140 CCDC69A6NI79 296 aa27.35■■□□□ 1.97
SLIT3-204ENST00000518140 KIAA2012Q0VF49 1180 aa27.35■■□□□ 1.97
SLIT3-204ENST00000518140 UBAC1Q9BSL1 405 aa27.35■■□□□ 1.97
SLIT3-204ENST00000518140 TNKSO95271 1327 aa27.35■■□□□ 1.97
SLIT3-204ENST00000518140 ORC4O43929 436 aa27.34■■□□□ 1.97
SLIT3-204ENST00000518140 SART3Q15020 963 aaKnown RBP27.34■■□□□ 1.97
SLIT3-204ENST00000518140 DNM1Q05193 864 aaKnown RBP27.34■■□□□ 1.97
SLIT3-204ENST00000518140 DACT2Q5SW24 774 aa27.34■■□□□ 1.97
SLIT3-204ENST00000518140 FAM43AQ8N2R8 423 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms