RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 AACSQ86V21 672 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 ZFYVE28Q9HCC9 887 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 TESPA1A2RU30 521 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-205ENST00000518060 HMMRO75330 724 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 ZAP70P43403 619 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 PPATQ06203 517 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 CD99L2Q8TCZ2 262 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPIDR-205ENST00000518060 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
SPIDR-205ENST00000518060 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 IDH1O75874 414 aaKnown RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 BAG3O95817 575 aa12.93□□□□□ -0.34
SPIDR-205ENST00000518060 RHBDL3P58872 404 aa12.93□□□□□ -0.34
SPIDR-205ENST00000518060 SP3Q02447 781 aa12.93□□□□□ -0.34
SPIDR-205ENST00000518060 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
SPIDR-205ENST00000518060 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 EAF2Q96CJ1 260 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
SPIDR-205ENST00000518060 MYH2Q9UKX2 1941 aa12.93□□□□□ -0.34
SPIDR-205ENST00000518060 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-205ENST00000518060 SLURP2P0DP57 97 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 SCYL3Q8IZE3 742 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 PIH1D3Q9NQM4 214 aaKnown RBP12.92□□□□□ -0.34
SPIDR-205ENST00000518060 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 AK9Q5TCS8 1911 aa12.92□□□□□ -0.34
SPIDR-205ENST00000518060 PLCG2P16885 1265 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 CYP7A1P22680 504 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
SPIDR-205ENST00000518060 OTOP1Q7RTM1 612 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 MAPKAPK5Q8IW41 473 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-205ENST00000518060 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 TRIM34Q9BYJ4 488 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-205ENST00000518060 EFCC1Q9HA90 598 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.91□□□□□ -0.34
SPIDR-205ENST00000518060 NDUFB9Q9Y6M9 179 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 ATRNL1Q5VV63 1379 aa12.91□□□□□ -0.34
SPIDR-205ENST00000518060 PDHXO00330 501 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-205ENST00000518060 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
SPIDR-205ENST00000518060 KIF22Q14807 665 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 C20orf194Q5TEA3 1177 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
SPIDR-205ENST00000518060 ZNF512BQ96KM6 892 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-205ENST00000518060 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-205ENST00000518060 DOCK2Q92608 1830 aa12.9□□□□□ -0.34
SPIDR-205ENST00000518060 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 ADGRA1Q86SQ6 560 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-205ENST00000518060 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-205ENST00000518060 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
SPIDR-205ENST00000518060 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
SPIDR-205ENST00000518060 CPA4Q9UI42 421 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 MAST2Q6P0Q8 1798 aa12.89□□□□□ -0.35
SPIDR-205ENST00000518060 CXCL11O14625 94 aa12.88□□□□□ -0.35
SPIDR-205ENST00000518060 TLR2O60603 784 aa12.88□□□□□ -0.35
SPIDR-205ENST00000518060 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 PTPRAP18433 802 aa12.88□□□□□ -0.35
SPIDR-205ENST00000518060 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 MAP3K12Q12852 859 aa12.88□□□□□ -0.35
SPIDR-205ENST00000518060 YTHDC1Q96MU7 727 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
SPIDR-205ENST00000518060 FLT1P17948 1338 aa12.88□□□□□ -0.35
SPIDR-205ENST00000518060 LAMB1P07942 1786 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 HLA-DOAP06340 250 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 USP5P45974 858 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms