RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 GATA4P43694 442 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 WDR4P57081 412 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 FKBP5Q13451 457 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 DCTN1Q14203 1278 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 ARID5BQ14865 1188 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 NFE2L2Q16236 605 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 TXNRD1Q16881 649 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 GORABQ5T7V8 394 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 EGFLAMQ63HQ2 1017 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 IL17REQ8NFR9 667 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 DHX38Q92620 1227 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 SMARCC1Q92922 1105 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 PLEKHF1Q96S99 279 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 KLF16Q9BXK1 252 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 SLC52A2Q9HAB3 445 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 ZNF358Q9NW07 568 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 BIN2Q9UBW5 565 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 CCNL1Q9UK58 526 aaPredicted RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 RBM19Q9Y4C8 960 aaKnown RBP3.54□□□□□ -1.84
SKP1-204ENST00000517691 MAP3K5Q99683 1374 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 LRRC37A3O60309 1634 aa3.54□□□□□ -1.84
SKP1-204ENST00000517691 CDC14CA4D256 554 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 BCL9O00512 1426 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 VARSP26640 1264 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 TMPOP42166 694 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 SCNN1DP51172 638 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 ERVK-9P63128 1117 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 ARHGAP4P98171 946 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 SLC39A6Q13433 755 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 MTMR3Q13615 1198 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 R3HDM1Q15032 1099 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 SLC27A3Q5K4L6 730 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 FBXO33Q7Z6M2 555 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TTC5Q8N0Z6 440 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 PNISRQ8TF01 805 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 SPACA7Q96KW9 195 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 THUMPD2Q9BTF0 503 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 MKNK1Q9BUB5 465 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 OSBPL3Q9H4L5 887 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 ZFAND3Q9H8U3 227 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 ATG3Q9NT62 314 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 STK32BQ9NY57 414 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 FAM208AQ9UK61 1670 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 PARP4Q9UKK3 1724 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 MAP4K5Q9Y4K4 846 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 LAS1LQ9Y4W2 734 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 BRWD3Q6RI45 1802 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 RGPD2P0DJD1 1756 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 PALLDQ8WX93 1383 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 PLEKHG2Q9H7P9 1386 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 LOC102724428A0A0B4J2F2 783 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 SLC35F4A4IF30 521 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 H3BRB1 525 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 APAF1O14727 1248 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 HTATSF1O43719 755 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 C21orf2O43822 256 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 BMP2P12643 396 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 SIK1P57059 783 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 HDLBPQ00341 1268 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 FKBP4Q02790 459 aaKnown RBP eCLIP3.53□□□□□ -1.84
SKP1-204ENST00000517691 KRTAP1-1Q07627 177 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 LMOD3Q0VAK6 560 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 NNTQ13423 1086 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TAF7Q15545 349 aaPredicted RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 CCDC144BQ3MJ40 725 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 C6orf118Q5T5N4 469 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 VASH1Q7L8A9 365 aaPredicted RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 NOP9Q86U38 636 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 PIK3R5Q8WYR1 880 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 ITPKCQ96DU7 683 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 CDK15Q96Q40 435 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 BACH2Q9BYV9 841 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TANGO6Q9C0B7 1094 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 PIF1Q9H611 641 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TUT1Q9H6E5 874 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 TMPRSS4Q9NRS4 437 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 MBIPQ9NS73 344 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 MIS18AQ9NYP9 233 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TFCP2L1Q9NZI6 479 aa3.53□□□□□ -1.84
SKP1-204ENST00000517691 TMA7Q9Y2S6 64 aaKnown RBP3.53□□□□□ -1.84
SKP1-204ENST00000517691 DYRK3O43781 588 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 MYCP01106 439 aaPredicted RBP3.52□□□□□ -1.85
SKP1-204ENST00000517691 EPHA4P54764 986 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 FGD1P98174 961 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 NAA30Q147X3 362 aaPredicted RBP3.52□□□□□ -1.85
SKP1-204ENST00000517691 HSP90AB4PQ58FF6 505 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 TNS4Q8IZW8 715 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 NLGN1Q8N2Q7 840 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 EVI5LQ96CN4 794 aa3.52□□□□□ -1.85
SKP1-204ENST00000517691 KDM6AO15550 1401 aaPredicted RBP3.52□□□□□ -1.85
SKP1-204ENST00000517691 CCER2I3L3R5 266 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 KCNQ3O43525 872 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 LILRA1O75019 489 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 NPR3P17342 541 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 IGFBP4P22692 258 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 HMGB2P26583 209 aaKnown RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 IGBP1P78318 339 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SLC15A2Q16348 729 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 PTPROQ16827 1216 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SDE2Q6IQ49 451 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms