RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 DAGLAQ9Y4D2 1042 aa13.05□□□□□ -0.32
PDGFRB-203ENST00000517660 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 TLR2O60603 784 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 FARP2O94887 1054 aaPredicted RBP13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 RLBP1P12271 317 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 RASGRF1Q13972 1273 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 POLA2Q14181 598 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 CCL15Q16663 113 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 GORABQ5T7V8 394 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 NKX2-3Q8TAU0 364 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 PDS5AQ29RF7 1337 aaKnown RBP13.04□□□□□ -0.32
PDGFRB-203ENST00000517660 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 U2AF1L4Q8WU68 220 aaKnown RBP13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 FAM151AQ8WW52 585 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 TRIM47Q96LD4 638 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 ABCF2Q9UG63 623 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.03□□□□□ -0.32
PDGFRB-203ENST00000517660 EVI5O60447 810 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 MS4A1P11836 297 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 GRK4P32298 578 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 PRMT2P55345 433 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 DCAF15Q66K64 600 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 GUCD1Q96NT3 240 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 GPR108Q9NPR9 543 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 CSADQ9Y600 493 aa13.02□□□□□ -0.33
PDGFRB-203ENST00000517660 BTBD19C9JJ37 291 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 GNRH1P01148 92 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 OSBPP22059 807 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 VGLL4Q14135 290 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
PDGFRB-203ENST00000517660 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 RPAP1Q9BWH6 1393 aaPredicted RBP13□□□□□ -0.33
PDGFRB-203ENST00000517660 GAKO14976 1311 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 COL9A1P20849 921 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
PDGFRB-203ENST00000517660 GTF2A2P52657 109 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 TCP10Q12799 353 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 NFIAQ12857 509 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 PANK1Q8TE04 598 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
PDGFRB-203ENST00000517660 RPTORQ8N122 1335 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 ENTPD3O75355 529 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 SGPL1O95470 568 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 LDHCP07864 332 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 PSMC4P43686 418 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 CCDC158Q5M9N0 1113 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 IDI2Q9BXS1 227 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 ZMYND8Q9ULU4 1186 aaPredicted RBP12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
PDGFRB-203ENST00000517660 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 BTDP43251 543 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 GSTO1P78417 241 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 MECOMQ03112 1051 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 KIF22Q14807 665 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 CEP85Q6P2H3 762 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 TBC1D9Q6ZT07 1266 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 DIS3LQ8TF46 1054 aaKnown RBP12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 CPA4Q9UI42 421 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 SNCAIPQ9Y6H5 919 aa12.98□□□□□ -0.33
PDGFRB-203ENST00000517660 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 MYPNQ86TC9 1320 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 MCAMP43121 646 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 RGS3P49796 1198 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms