RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 RNF208Q9H0X6 261 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NR2E3Q9Y5X4 410 aa9.11□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PSME4Q14997 1843 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CXCL11O14625 94 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 IPO8O15397 1037 aaKnown RBP9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 TFRCP02786 760 aaKnown RBP9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 LDHCP07864 332 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 GNAI3P08754 354 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PRDX5P30044 214 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 RGS3P49796 1198 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 MVPQ14764 893 aaKnown RBP9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 COA7Q96BR5 231 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ARHGAP39Q9C0H5 1083 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SRRDQ9UH36 339 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
TNFRSF11B-202ENST00000517352 ENTPD3O75355 529 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CYP2C8P10632 490 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 FGFR2P21802 821 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 OSBPP22059 807 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SLFN5Q08AF3 891 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 NFIAQ12857 509 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 G3BP1Q13283 466 aaKnown RBP eCLIP9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 PABPC4Q13310 644 aaKnown RBP eCLIP9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 C17orf99Q6UX52 265 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 SCYL3Q8IZE3 742 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
TNFRSF11B-202ENST00000517352 H0YGN5 161 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 BAG3O95817 575 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CT47B1P0C2W7 299 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CCL5P13501 91 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 BTDP43251 543 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PHKA1P46020 1223 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TIMM10P62072 90 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SLAIN1Q8ND83 568 aa9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 COLQQ9Y215 455 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 RPAP1Q9BWH6 1393 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF11B-202ENST00000517352 A0A1B0GUL7 405 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ADCY3O60266 1144 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 EVI5O60447 810 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 NOL9Q5SY16 702 aaKnown RBP9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ATG9AQ7Z3C6 839 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CRACR2BQ8N4Y2 399 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 AS3MTQ9HBK9 375 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 FAM198AQ9UFP1 575 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ZNF112Q9UJU3 913 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SALL1Q9NSC2 1324 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GNAI2P04899 355 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GJB1P08034 283 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PTPRAP18433 802 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ADORA1P30542 326 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 RFX5P48382 616 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PRKCZQ05513 592 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TFCP2Q12800 502 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 RASGRF1Q13972 1273 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 MTFR1Q15390 333 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CCDC158Q5M9N0 1113 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ZFPM1Q8IX07 1006 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 XAGE2Q96GT9 111 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TMOD4Q9NZQ9 345 aa9.06□□□□□ -0.96
TNFRSF11B-202ENST00000517352 A0A0G2JLL6 359 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 FARP2O94887 1054 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 UQCRFS1P1P0C7P4 283 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GJA8P48165 433 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 FLT3LGP49771 235 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 MECOMQ03112 1051 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SPP2Q13103 211 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ATF7IPQ6VMQ6 1270 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PRRT2Q7Z6L0 340 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 TEX11Q8IYF3 940 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ANKRD13CQ8N6S4 541 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 SPATA5Q8NB90 893 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 U2AF1L4Q8WU68 220 aaKnown RBP9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 DEFB118Q96PH6 123 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 IDI2Q9BXS1 227 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
TNFRSF11B-202ENST00000517352 MAP4K4O95819 1239 aaPredicted RBP9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 INHAP05111 366 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 ELNP15502 786 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 PLCG2P16885 1265 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 CAPN2P17655 700 aa9.04□□□□□ -0.96
TNFRSF11B-202ENST00000517352 GCLCP48506 637 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms