RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GPBAR1Q8TDU6 330 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 DCAF11Q8TEB1 546 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 JARID2Q92833 1246 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 LACRTQ9GZZ8 138 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 IGFLR1Q9H665 355 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 CBX8Q9HC52 389 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 SH2B1Q9NRF2 756 aaPredicted RBP4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 GGA1Q9UJY5 639 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 PPME1Q9Y570 386 aa4.87□□□□□ -1.63
RNU6-840P-201ENST00000517275 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 CDC45O75419 566 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 ALAS2P22557 587 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 ARL4DP49703 201 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 AFF1P51825 1210 aaKnown RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 SRSF11Q05519 484 aaKnown RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 LONRF2Q1L5Z9 754 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 WIPI1Q5MNZ9 446 aaPredicted RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 RNF187Q5TA31 235 aaPredicted RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 MAP1SQ66K74 1059 aaPredicted RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 FAM117BQ6P1L5 589 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 CYFIP1Q7L576 1253 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 ZCRB1Q8TBF4 217 aaKnown RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 THAP3Q8WTV1 239 aaPredicted RBP4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 APPBP2Q92624 585 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 GPATCH3Q96I76 525 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 CORO1BQ9BR76 489 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 EPN3Q9H201 632 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 TNKS2Q9H2K2 1166 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 IGF1RP08069 1367 aa4.86□□□□□ -1.63
RNU6-840P-201ENST00000517275 C11orf95C9JLR9 678 aaPredicted RBP4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 FSCN2O14926 492 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 ALBP02768 609 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 CCNFP41002 786 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 PDE4BQ07343 736 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 MLECQ14165 292 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 POU4F3Q15319 338 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 PTPROQ16827 1216 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 LRFN4Q6PJG9 635 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 HDXQ7Z353 690 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 TTC6Q86TZ1 520 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 HOMER1Q86YM7 354 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 LILRB2Q8N423 598 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 PLPPR2Q96GM1 343 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 FEZ1Q99689 392 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 PHAXQ9H814 394 aaKnown RBP4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 CNNM2Q9H8M5 875 aa4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 NXF1Q9UBU9 619 aaKnown RBP4.85□□□□□ -1.63
RNU6-840P-201ENST00000517275 LCE2BO14633 110 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 ZNF862O60290 1169 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 LILRB5O75023 590 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 GJB6O95452 261 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 NME1P15531 152 aaKnown RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 ERVK-24P63145 666 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 GSTM4Q03013 218 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 SQSTM1Q13501 440 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 NCAPHQ15003 741 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 ZC3H12AQ5D1E8 599 aaKnown RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 ZC3H12BQ5HYM0 836 aaKnown RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 MSL1Q68DK7 614 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 OVOS1Q6IE37 1185 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 MRM1Q6IN84 353 aaKnown RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 GDF6Q6KF10 455 aaPredicted RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 MPRIPQ6WCQ1 1025 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 FAM178BQ8IXR5 827 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 DTWD1Q8N5C7 304 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 IL22RA1Q8N6P7 574 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 MICAL1Q8TDZ2 1067 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 DNAJC7Q99615 494 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 IRX2Q9BZI1 471 aaPredicted RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 JPH1Q9HDC5 661 aaPredicted RBP4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 FANCLQ9NW38 375 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 REV1Q9UBZ9 1251 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 PCDHA4Q9UN74 947 aa4.84□□□□□ -1.63
RNU6-840P-201ENST00000517275 LOC100289279A0A1B0GTE1 492 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 GRIN3BO60391 1043 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 VIL1P09327 827 aaKnown RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 ACRP10323 421 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 MAOBP27338 520 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 CAP2P40123 477 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 CDK8P49336 464 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 ZNF143P52747 638 aaPredicted RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 COL9A3Q14050 684 aaPredicted RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 INPP5AQ14642 412 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 SUZ12Q15022 739 aaKnown RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 SETDB1Q15047 1291 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 MTERF2Q49AM1 385 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 TAF7LQ5H9L4 462 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 FBXW10Q5XX13 1052 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 LARP1BQ659C4 914 aaKnown RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 HGSNATQ68CP4 663 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 C16orf86Q6ZW13 317 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 NLRC3Q7RTR2 1065 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 WFDC8Q8IUA0 241 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 SLFN12Q8IYM2 578 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 GPR161Q8N6U8 529 aaKnown RBP4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 ZSCAN1Q8NBB4 408 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 ATG4CQ96DT6 458 aa4.83□□□□□ -1.64
RNU6-840P-201ENST00000517275 ACSBG1Q96GR2 724 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms