RNA–Protein interactions for RNA: ENST00000516336.1

RNU6-1225P-201, Transcript of RNA, U6 small nuclear 1225, pseudogene, humanhuman

BASIC

Gene RNU6-1225P, Length 65 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1225P-201ENST00000516336 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SEC16BQ96JE7 1060 aa6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PPP1R1BQ9UD71 204 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
RNU6-1225P-201ENST00000516336 DCDC2CA8MYV0 355 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 FGRP09769 529 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 MCM4P33991 863 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 COL9A2Q14055 689 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 NUTM2GQ5VZR2 741 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 HDXQ7Z353 690 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 MCF2L2Q86YR7 1114 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ELMO3Q96BJ8 720 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 BRMS1Q9HCU9 246 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CSADQ9Y600 493 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SNCAIPQ9Y6H5 919 aa6.62□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 F8W735 103 aaPredicted RBP6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 GFRA2O00451 464 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SOX9P48436 509 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ID3Q02535 119 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 TMEM130Q8N3G9 435 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 LENG1Q96BZ8 264 aaPredicted RBP6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SUGCTQ9HAC7 445 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 USP21Q9UK80 565 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PPP1R9AQ9ULJ8 1098 aa6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
RNU6-1225P-201ENST00000516336 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 GRIN3BO60391 1043 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ALX3O95076 343 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 APBA3O96018 575 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ZNF165P49910 485 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 GK5Q6ZS86 529 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CYFIP1Q7L576 1253 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 C12orf40Q86WS4 652 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SMG8Q8ND04 991 aaKnown RBP6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 NACC1Q96RE7 527 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 AP4E1Q9UPM8 1137 aa6.6□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 C9orf172C9J069 976 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ADH5P11766 374 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ERVK-24P63145 666 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CLCQ05315 142 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 FDX2Q6P4F2 183 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CCDC81Q6ZN84 652 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 REXO1Q8N1G1 1221 aaKnown RBP6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 UBXN4Q92575 508 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 FERD3LQ96RJ6 166 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 CRIM1Q9NZV1 1036 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 PPT2Q9UMR5 302 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
RNU6-1225P-201ENST00000516336 TIAF1O95411 115 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 DRD2P14416 443 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 GTF2F1P35269 517 aaKnown RBP eCLIP6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 NRG1Q02297 640 aaPredicted RBP6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 CPLX3Q8WVH0 158 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 FANCD2OSQ96PS1 177 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 SRRTQ9BXP5 876 aaKnown RBP6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 STRIP2Q9ULQ0 834 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 CORINQ9Y5Q5 1042 aa6.58□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PRR36Q9H6K5 1346 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 ATE1O95260 518 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 HTR3BO95264 441 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 GLB1P16278 677 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 RING1Q06587 406 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 FBXW10Q5XX13 1052 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 ALYREFQ86V81 257 aaKnown RBP6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 ATXN3LQ9H3M9 355 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 EHMT1Q9H9B1 1298 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 DISC1Q9NRI5 854 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 ZNRF3Q9ULT6 936 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 TACC3Q9Y6A5 838 aa6.57□□□□□ -1.36
RNU6-1225P-201ENST00000516336 FANCGO15287 622 aa6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PLCG1P19174 1290 aa6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 NOS3P29474 1203 aa6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 GRK4P32298 578 aa6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PREPP48147 710 aa6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 IREB2P48200 963 aaKnown RBP6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
RNU6-1225P-201ENST00000516336 PDE4BQ07343 736 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms