RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 CTU1Q7Z7A3 348 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 AACSQ86V21 672 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IFNL1Q8IU54 200 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CDAN1Q8IWY9 1227 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 EAF2Q96CJ1 260 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CLMNQ96JQ2 1002 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 OSBPL5Q9H0X9 879 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 GINM1Q9NU53 330 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 USP40Q9NVE5 1235 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 RAI14Q9P0K7 980 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 HERC5Q9UII4 1024 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 EXOC6BQ9Y2D4 811 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 SNCAIPQ9Y6H5 919 aa7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PHIPQ8WWQ0 1821 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 AK9Q5TCS8 1911 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 GPR25O00155 361 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CYP2E1P05181 493 aaPredicted RBP7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CETPP11597 493 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 RGS3P49796 1198 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 RRP1P56182 461 aaKnown RBP7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PPP4CP60510 307 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MAP3K12Q12852 859 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 SCYL3Q8IZE3 742 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZNF384Q8TF68 577 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 OTUD5Q96G74 571 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MS4A4AQ96JQ5 239 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
SCARNA18.1-201ENST00000516330 FLT1P17948 1338 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MYO5AQ9Y4I1 1855 aaKnown RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CASP8AP2Q9UKL3 1982 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CCL15-CCL14A0A0B4J2E2 113 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IGF2BP3O00425 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CXCL11O14625 94 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CTNND1O60716 968 aaKnown RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 FKTNO75072 461 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 GJA5P36382 358 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZAP70P43403 619 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TCP10Q12799 353 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ARHGEF6Q15052 776 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CCL15Q16663 113 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZSCAN29Q8IWY8 852 aaPredicted RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TEX11Q8IYF3 940 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ERO1AQ96HE7 468 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ABHD8Q96I13 439 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 GPATCH3Q96I76 525 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 LRRCC1Q9C099 1032 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MCOLN1Q9GZU1 580 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TLR7Q9NYK1 1049 aaKnown RBP7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TSKSQ9UJT2 592 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 FZD1Q9UP38 647 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 SLC45A1Q9Y2W3 748 aa7.3□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MYH1P12882 1939 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IRF6O14896 467 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IDH1O75874 414 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 GNRH1P01148 92 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MKRN3Q13064 507 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PICALMQ13492 652 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 DGKZQ13574 1117 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TAF1CQ15572 869 aaPredicted RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 FBXO46Q6PJ61 603 aaPredicted RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 FASTKD5Q7L8L6 764 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ANKRD23Q86SG2 305 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 SIRT2Q8IXJ6 389 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 BRI3BPQ8WY22 251 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PARK7Q99497 189 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CCDC8Q9H0W5 538 aaPredicted RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 EHD4Q9H223 541 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZFYVE28Q9HCC9 887 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.241e-68■■□□□ 11.9
SCARNA18.1-201ENST00000516330 PI4KBQ9UBF8 816 aa7.29□□□□□ -1.24
SCARNA18.1-201ENST00000516330 A0A0G2JLL6 359 aaPredicted RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 DDTLA6NHG4 134 aaPredicted RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PHF20L1A8MW92 1017 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TLR2O60603 784 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ASNSP08243 561 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ATP5JP18859 108 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 INPP5BP32019 993 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 CRHR2Q13324 411 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 LRRFIP1Q32MZ4 808 aaKnown RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 SH3BP5LQ7L8J4 393 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PRRT2Q7Z6L0 340 aaPredicted RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PROCA1Q8NCQ7 364 aaPredicted RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 ZKSCAN4Q969J2 545 aaPredicted RBP7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 AS3MTQ9HBK9 375 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 IL1RAPL2Q9NP60 686 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 PNMA3Q9UL41 463 aa7.28□□□□□ -1.24
SCARNA18.1-201ENST00000516330 TTC41PQ6P2S7 1318 aa7.27□□□□□ -1.24
SCARNA18.1-201ENST00000516330 MYH8P13535 1937 aa7.27□□□□□ -1.25
SCARNA18.1-201ENST00000516330 TBC1D8O95759 1140 aa7.27□□□□□ -1.25
SCARNA18.1-201ENST00000516330 PTPRAP18433 802 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms