RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 PRDM6Q9NQX0 595 aa18.71■□□□□ 0.59
TNPO1-210ENST00000515483 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 NFIAQ12857 509 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 FAM110CQ1W6H9 321 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 CDC42EP5Q6NZY7 148 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 PNMA3Q9UL41 463 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 OGDHLQ9ULD0 1010 aa18.7■□□□□ 0.58
TNPO1-210ENST00000515483 PDE8BO95263 885 aa18.69■□□□□ 0.58
TNPO1-210ENST00000515483 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
TNPO1-210ENST00000515483 GUCD1Q96NT3 240 aa18.69■□□□□ 0.58
TNPO1-210ENST00000515483 FAM198AQ9UFP1 575 aa18.69■□□□□ 0.58
TNPO1-210ENST00000515483 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
TNPO1-210ENST00000515483 DAGLAQ9Y4D2 1042 aa18.69■□□□□ 0.58
TNPO1-210ENST00000515483 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
TNPO1-210ENST00000515483 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
TNPO1-210ENST00000515483 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
TNPO1-210ENST00000515483 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
TNPO1-210ENST00000515483 IFIT1P09914 478 aaKnown RBP18.67■□□□□ 0.58
TNPO1-210ENST00000515483 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
TNPO1-210ENST00000515483 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
TNPO1-210ENST00000515483 VCANP13611 3396 aa18.67■□□□□ 0.58
TNPO1-210ENST00000515483 TRIM75PA6NK02 468 aa18.66■□□□□ 0.58
TNPO1-210ENST00000515483 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
TNPO1-210ENST00000515483 GCLCP48506 637 aaPredicted RBP18.66■□□□□ 0.58
TNPO1-210ENST00000515483 LRRC24Q50LG9 513 aa18.66■□□□□ 0.58
TNPO1-210ENST00000515483 GJD2Q9UKL4 321 aa18.66■□□□□ 0.58
TNPO1-210ENST00000515483 IL16Q14005 1332 aa18.66■□□□□ 0.58
TNPO1-210ENST00000515483 VAMP4O75379 141 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
TNPO1-210ENST00000515483 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 ZFPM1Q8IX07 1006 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 SUCLG2Q96I99 432 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 FAM161BQ96MY7 647 aa18.65■□□□□ 0.58
TNPO1-210ENST00000515483 AK9Q5TCS8 1911 aa18.64■□□□□ 0.58
TNPO1-210ENST00000515483 ENTPD3O75355 529 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 MDM2Q00987 491 aaPredicted RBP18.64■□□□□ 0.57
TNPO1-210ENST00000515483 MAP3K10Q02779 954 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 TRIM32Q13049 653 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 PUM3Q15397 648 aaKnown RBP18.64■□□□□ 0.57
TNPO1-210ENST00000515483 ZNF697Q5TEC3 545 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.57
TNPO1-210ENST00000515483 SRCIN1Q9C0H9 1055 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 PFASO15067 1338 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 ATRNL1Q5VV63 1379 aa18.64■□□□□ 0.57
TNPO1-210ENST00000515483 PABPC4Q13310 644 aaKnown RBP eCLIP18.63■□□□□ 0.57
TNPO1-210ENST00000515483 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
TNPO1-210ENST00000515483 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
TNPO1-210ENST00000515483 LBHD1Q9BQE6 289 aaPredicted RBP18.63■□□□□ 0.57
TNPO1-210ENST00000515483 CACNA1FO60840 1977 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 DOCK3Q8IZD9 2030 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
TNPO1-210ENST00000515483 COL6A1P12109 1028 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 RGS3P49796 1198 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 IDI2Q9BXS1 227 aa18.62■□□□□ 0.57
TNPO1-210ENST00000515483 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
TNPO1-210ENST00000515483 PRKAR2AP13861 404 aaKnown RBP18.61■□□□□ 0.57
TNPO1-210ENST00000515483 SLC5A1P13866 664 aa18.61■□□□□ 0.57
TNPO1-210ENST00000515483 FGFR2P21802 821 aa18.61■□□□□ 0.57
TNPO1-210ENST00000515483 PRDX5P30044 214 aa18.61■□□□□ 0.57
TNPO1-210ENST00000515483 RABL6Q3YEC7 729 aaPredicted RBP18.61■□□□□ 0.57
TNPO1-210ENST00000515483 TRMT44Q8IYL2 757 aaKnown RBP18.61■□□□□ 0.57
TNPO1-210ENST00000515483 TRIB2Q92519 343 aa18.61■□□□□ 0.57
TNPO1-210ENST00000515483 SYMPKQ92797 1274 aaKnown RBP18.61■□□□□ 0.57
TNPO1-210ENST00000515483 BICC1Q9H694 974 aaKnown RBP18.61■□□□□ 0.57
TNPO1-210ENST00000515483 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
TNPO1-210ENST00000515483 SPTBN5Q9NRC6 3674 aaKnown RBP18.6■□□□□ 0.57
TNPO1-210ENST00000515483 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
TNPO1-210ENST00000515483 LRRC26Q2I0M4 334 aa18.6■□□□□ 0.57
TNPO1-210ENST00000515483 MAFAQ8NHW3 353 aaPredicted RBP18.6■□□□□ 0.57
TNPO1-210ENST00000515483 NBPF7P0C2Y1 421 aaPredicted RBP18.59■□□□□ 0.57
TNPO1-210ENST00000515483 XRCC5P13010 732 aaKnown RBP18.59■□□□□ 0.57
TNPO1-210ENST00000515483 LPIN2Q92539 896 aa18.59■□□□□ 0.57
TNPO1-210ENST00000515483 CDX2Q99626 313 aaPredicted RBP18.59■□□□□ 0.57
TNPO1-210ENST00000515483 TBC1D2Q9BYX2 928 aa18.59■□□□□ 0.57
TNPO1-210ENST00000515483 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
TNPO1-210ENST00000515483 GNL3LQ9NVN8 582 aaKnown RBP18.59■□□□□ 0.57
TNPO1-210ENST00000515483 COL2A1P02458 1487 aaPredicted RBP18.58■□□□□ 0.57
TNPO1-210ENST00000515483 UTYO14607 1347 aa18.58■□□□□ 0.57
TNPO1-210ENST00000515483 CYP2B6P20813 491 aa18.58■□□□□ 0.56
TNPO1-210ENST00000515483 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.56
TNPO1-210ENST00000515483 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
TNPO1-210ENST00000515483 NUDT12Q9BQG2 462 aa18.58■□□□□ 0.56
TNPO1-210ENST00000515483 TTC28Q96AY4 2481 aa18.58■□□□□ 0.56
TNPO1-210ENST00000515483 LAMA2P24043 3122 aaKnown RBP18.58■□□□□ 0.56
TNPO1-210ENST00000515483 SPP2Q13103 211 aa18.57■□□□□ 0.56
TNPO1-210ENST00000515483 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
TNPO1-210ENST00000515483 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
TNPO1-210ENST00000515483 ASCC2Q9H1I8 757 aaPredicted RBP18.57■□□□□ 0.56
TNPO1-210ENST00000515483 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.57■□□□□ 0.56
TNPO1-210ENST00000515483 MORF4L1Q9UBU8 362 aa18.57■□□□□ 0.56
TNPO1-210ENST00000515483 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
TNPO1-210ENST00000515483 DDTLA6NHG4 134 aaPredicted RBP18.56■□□□□ 0.56
TNPO1-210ENST00000515483 ZKSCAN1P17029 563 aaPredicted RBP18.56■□□□□ 0.56
TNPO1-210ENST00000515483 EXOSC9Q06265 439 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms