RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SNX27Q96L92 541 aa15.13■□□□□ 0.01
SMAD5-210ENST00000515005 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
SMAD5-210ENST00000515005 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
SMAD5-210ENST00000515005 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
SMAD5-210ENST00000515005 FAM151AQ8WW52 585 aa15.12■□□□□ 0.01
SMAD5-210ENST00000515005 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
SMAD5-210ENST00000515005 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
SMAD5-210ENST00000515005 IQSEC3Q9UPP2 1182 aaPredicted RBP15.12■□□□□ 0.01
SMAD5-210ENST00000515005 TCF20Q9UGU0 1960 aaKnown RBP15.11■□□□□ 0.01
SMAD5-210ENST00000515005 PTPRAP18433 802 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 CYP2B6P20813 491 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
SMAD5-210ENST00000515005 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
SMAD5-210ENST00000515005 IFIT5Q13325 482 aaKnown RBP15.11■□□□□ 0.01
SMAD5-210ENST00000515005 GCKRQ14397 625 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 PPM1EQ8WY54 764 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 C1QTNF1Q9BXJ1 281 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 PRKAG2Q9UGJ0 569 aa15.11■□□□□ 0.01
SMAD5-210ENST00000515005 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
SMAD5-210ENST00000515005 CACNB2Q08289 660 aaPredicted RBP15.1■□□□□ 0.01
SMAD5-210ENST00000515005 TRIM26Q12899 539 aaPredicted RBP15.1■□□□□ 0.01
SMAD5-210ENST00000515005 TREML2Q5T2D2 321 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 ZNF594Q96JF6 807 aaPredicted RBP15.1■□□□□ 0.01
SMAD5-210ENST00000515005 MRIQ9BWK5 157 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 AGTPBP1Q9UPW5 1226 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 HCN4Q9Y3Q4 1203 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 FRMPD3Q5JV73 1810 aa15.1■□□□□ 0.01
SMAD5-210ENST00000515005 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
SMAD5-210ENST00000515005 NECAB3Q96P71 396 aaPredicted RBP15.09■□□□□ 0.01
SMAD5-210ENST00000515005 THEGQ9P2T0 379 aa15.09■□□□□ 0.01
SMAD5-210ENST00000515005 CHMP3Q9Y3E7 222 aa15.09■□□□□ 0.01
SMAD5-210ENST00000515005 TRIM75PA6NK02 468 aa15.08■□□□□ 0
SMAD5-210ENST00000515005 NFIAQ12857 509 aa15.08■□□□□ 0
SMAD5-210ENST00000515005 LDHAL6AQ6ZMR3 332 aa15.08■□□□□ 0
SMAD5-210ENST00000515005 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0
SMAD5-210ENST00000515005 C8orf58Q8NAV2 365 aa15.08■□□□□ 0
SMAD5-210ENST00000515005 BADQ92934 168 aa15.08■□□□□ 0
SMAD5-210ENST00000515005 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.08■□□□□ 0
SMAD5-210ENST00000515005 ZNF853P0CG23 659 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 RTP1P59025 263 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 MRPS5P82675 430 aaKnown RBP15.07■□□□□ 0
SMAD5-210ENST00000515005 FOXO4P98177 505 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 UBE4AQ14139 1066 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 PDE3AQ14432 1141 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
SMAD5-210ENST00000515005 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 CNNM1Q9NRU3 951 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 PNMA3Q9UL41 463 aa15.07■□□□□ 0
SMAD5-210ENST00000515005 GCLCP48506 637 aaPredicted RBP15.06■□□□□ 0
SMAD5-210ENST00000515005 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
SMAD5-210ENST00000515005 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
SMAD5-210ENST00000515005 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
SMAD5-210ENST00000515005 FAM198AQ9UFP1 575 aa15.06■□□□□ 0
SMAD5-210ENST00000515005 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
SMAD5-210ENST00000515005 XRCC5P13010 732 aaKnown RBP15.05■□□□□ -0
SMAD5-210ENST00000515005 CCL14Q16627 93 aa15.05■□□□□ -0
SMAD5-210ENST00000515005 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
SMAD5-210ENST00000515005 FBXO33Q7Z6M2 555 aa15.05■□□□□ -0
SMAD5-210ENST00000515005 PRDM5Q9NQX1 630 aaPredicted RBP15.05■□□□□ -0
SMAD5-210ENST00000515005 ATP11BQ9Y2G3 1177 aa15.05■□□□□ -0
SMAD5-210ENST00000515005 DOCK1Q14185 1865 aa15.05■□□□□ -0
SMAD5-210ENST00000515005 RLFQ13129 1914 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 DOCK2Q92608 1830 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 MAST3O60307 1309 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 FRAT2O75474 233 aaPredicted RBP15.04■□□□□ -0
SMAD5-210ENST00000515005 SLURP2P0DP57 97 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
SMAD5-210ENST00000515005 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 G2E3Q7L622 706 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 VPS37DQ86XT2 251 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 IL27Q8NEV9 243 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
SMAD5-210ENST00000515005 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 ZNF576Q9H609 170 aa15.04■□□□□ -0
SMAD5-210ENST00000515005 PEX10O60683 326 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 DNAJB2P25686 324 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 EPHA10Q5JZY3 1008 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 EPHX3Q9H6B9 360 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
SMAD5-210ENST00000515005 CCDC57Q2TAC2 916 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 AKNAD1Q5T1N1 836 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 SH3RF1Q7Z6J0 888 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 TRMT44Q8IYL2 757 aaKnown RBP15.02■□□□□ -0
SMAD5-210ENST00000515005 TSPYL6Q8N831 410 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 SOCS4Q8WXH5 440 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 ASCC2Q9H1I8 757 aaPredicted RBP15.02■□□□□ -0
SMAD5-210ENST00000515005 MORF4L1Q9UBU8 362 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 DAGLAQ9Y4D2 1042 aa15.02■□□□□ -0
SMAD5-210ENST00000515005 LRRFIP2Q9Y608 721 aaKnown RBP15.02■□□□□ -0
SMAD5-210ENST00000515005 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
SMAD5-210ENST00000515005 TRIM43BA6NCK2 446 aa15.01□□□□□ -0.01
SMAD5-210ENST00000515005 EPHB4P54760 987 aa15.01□□□□□ -0.01
SMAD5-210ENST00000515005 CCDC85BQ15834 202 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms