RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 CSADQ9Y600 493 aa17.01■□□□□ 0.31
ITGA3-214ENST00000514834 TESPA1A2RU30 521 aaPredicted RBP17■□□□□ 0.31
ITGA3-214ENST00000514834 ENTPD3O75355 529 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
ITGA3-214ENST00000514834 DCAF15Q66K64 600 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 ZNF296Q8WUU4 475 aaPredicted RBP17■□□□□ 0.31
ITGA3-214ENST00000514834 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 ANTXR1Q9H6X2 564 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 DOCK2Q92608 1830 aa17■□□□□ 0.31
ITGA3-214ENST00000514834 SPDYE5A6NIY4 337 aa16.99■□□□□ 0.31
ITGA3-214ENST00000514834 GPR25O00155 361 aa16.99■□□□□ 0.31
ITGA3-214ENST00000514834 LDHCP07864 332 aa16.99■□□□□ 0.31
ITGA3-214ENST00000514834 INHBEP58166 350 aa16.99■□□□□ 0.31
ITGA3-214ENST00000514834 GSTO1P78417 241 aa16.99■□□□□ 0.31
ITGA3-214ENST00000514834 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
ITGA3-214ENST00000514834 MAST2Q6P0Q8 1798 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
ITGA3-214ENST00000514834 ERO1BQ86YB8 467 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
ITGA3-214ENST00000514834 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 CFHR5Q9BXR6 569 aa16.98■□□□□ 0.31
ITGA3-214ENST00000514834 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 CCL15-CCL14A0A0B4J2E2 113 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 FAM196BA6NMK8 535 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 IRF6O14896 467 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 HMMRO75330 724 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 CCL15Q16663 113 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
ITGA3-214ENST00000514834 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITGA3-214ENST00000514834 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-214ENST00000514834 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
ITGA3-214ENST00000514834 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
ITGA3-214ENST00000514834 CRHR2Q13324 411 aa16.96■□□□□ 0.31
ITGA3-214ENST00000514834 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
ITGA3-214ENST00000514834 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
ITGA3-214ENST00000514834 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-214ENST00000514834 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
ITGA3-214ENST00000514834 ALDH1A1P00352 501 aa16.95■□□□□ 0.3
ITGA3-214ENST00000514834 GTF2A2P52657 109 aa16.95■□□□□ 0.3
ITGA3-214ENST00000514834 CAP1Q01518 475 aa16.95■□□□□ 0.3
ITGA3-214ENST00000514834 PPIL2Q13356 520 aa16.95■□□□□ 0.3
ITGA3-214ENST00000514834 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
ITGA3-214ENST00000514834 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
ITGA3-214ENST00000514834 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
ITGA3-214ENST00000514834 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 CYP7A1P22680 504 aa16.94■□□□□ 0.3
ITGA3-214ENST00000514834 PPP4CP60510 307 aa16.94■□□□□ 0.3
ITGA3-214ENST00000514834 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 NOL9Q5SY16 702 aaKnown RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
ITGA3-214ENST00000514834 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
ITGA3-214ENST00000514834 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 CCDC85CA6NKD9 419 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 BTBD19C9JJ37 291 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 FKTNO75072 461 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
ITGA3-214ENST00000514834 PPATQ06203 517 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 MOGSQ13724 837 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 CCDC84Q86UT8 332 aaPredicted RBP16.93■□□□□ 0.3
ITGA3-214ENST00000514834 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
ITGA3-214ENST00000514834 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
ITGA3-214ENST00000514834 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
ITGA3-214ENST00000514834 PHIPQ8WWQ0 1821 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 GOLIM4O00461 696 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 BAG3O95817 575 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 CETPP11597 493 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 PTPRAP18433 802 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 OTUD7BQ6GQQ9 843 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 DNAJC2Q99543 621 aaKnown RBP16.91■□□□□ 0.3
ITGA3-214ENST00000514834 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
ITGA3-214ENST00000514834 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
ITGA3-214ENST00000514834 KCNH4Q9UQ05 1017 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
ITGA3-214ENST00000514834 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 CHGBP05060 677 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 JAG1P78504 1218 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 TAF1CQ15572 869 aaPredicted RBP16.9■□□□□ 0.3
ITGA3-214ENST00000514834 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 CRBNQ96SW2 442 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
ITGA3-214ENST00000514834 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 HTTP42858 3142 aa16.9■□□□□ 0.3
ITGA3-214ENST00000514834 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms