RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 AKTIPQ9H8T0 292 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 SUGCTQ9HAC7 445 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 RAD18Q9NS91 495 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 SYNGAP1Q96PV0 1343 aa8.27□□□□□ -1.09
HMGCS1-207ENST00000514610 DCDC2CA8MYV0 355 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 C9orf172C9J069 976 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 GFRA2O00451 464 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 APBA3O96018 575 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 ADH5P11766 374 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 MPP2Q14168 576 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 ADGRE1Q14246 886 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 MBTPS1Q14703 1052 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 SEZ6Q53EL9 994 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 REC114Q7Z4M0 266 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 SLC43A3Q8NBI5 491 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 CSADQ9Y600 493 aa8.26□□□□□ -1.09
HMGCS1-207ENST00000514610 ROBO2Q9HCK4 1378 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 CHRNA4P43681 627 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 CYFIP1Q7L576 1253 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 C12orf40Q86WS4 652 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 NKD1Q969G9 470 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 NACC1Q96RE7 527 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 BRMS1Q9HCU9 246 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 GINM1Q9NU53 330 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 CRIM1Q9NZV1 1036 aa8.25□□□□□ -1.09
HMGCS1-207ENST00000514610 BPNT1O95861 308 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 ATF4P18848 351 aaPredicted RBP8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 PREPP48147 710 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 IREB2P48200 963 aaKnown RBP8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 ID3Q02535 119 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 RING1Q06587 406 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 SOX4Q06945 474 aaPredicted RBP8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 C2CD4AQ8NCU7 369 aaPredicted RBP8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 UBL7Q96S82 380 aaPredicted RBP8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 CYP4F12Q9HCS2 524 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 AP4E1Q9UPM8 1137 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 EFR3BQ9Y2G0 817 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 SNCAIPQ9Y6H5 919 aa8.24□□□□□ -1.09
HMGCS1-207ENST00000514610 NTF4P34130 210 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 NRG1Q02297 640 aaPredicted RBP8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 CWF19L2Q2TBE0 894 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 ANKRD34AQ69YU3 496 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 FDX2Q6P4F2 183 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 HDXQ7Z353 690 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 CD163Q86VB7 1156 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 C12orf50Q8NA57 414 aaPredicted RBP8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 ELMO3Q96BJ8 720 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 MEGF10Q96KG7 1140 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 FANCD2OSQ96PS1 177 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 GMLQ99445 158 aa8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 GSX1Q9H4S2 264 aaPredicted RBP8.23□□□□□ -1.09
HMGCS1-207ENST00000514610 GRIN3BO60391 1043 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 GLB1P16278 677 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 DNAJA1P31689 397 aaKnown RBP8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 SOX9P48436 509 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 NASPP49321 788 aaPredicted RBP8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 ERVK-24P63145 666 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 GPAT2Q6NUI2 795 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 CORINQ9Y5Q5 1042 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
HMGCS1-207ENST00000514610 PRAMEF27A3QJZ7 478 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 NEFMP07197 916 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 FGRP09769 529 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 ARID5AQ03989 594 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 CLCQ05315 142 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 DYMQ7RTS9 669 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 MCF2L2Q86YR7 1114 aa8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 FAM46AQ96IP4 442 aaKnown RBP8.21□□□□□ -1.1
HMGCS1-207ENST00000514610 ITGB2P05107 769 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 TTLL4Q14679 1199 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 ZBTB37Q5TC79 503 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 GK5Q6ZS86 529 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 TXNRD3Q86VQ6 643 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 SPATA32Q96LK8 384 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 FAM105AQ9NUU6 356 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 PPT2Q9UMR5 302 aa8.2□□□□□ -1.1
HMGCS1-207ENST00000514610 MCM4P33991 863 aa8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 ATXN3LQ9H3M9 355 aa8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 PCDHB14Q9Y5E9 798 aa8.19□□□□□ -1.1
HMGCS1-207ENST00000514610 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms