RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 CDCA5Q96FF9 252 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 PUS7LQ9H0K6 701 aaKnown RBP11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
TOPBP1-209ENST00000513818 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 RNF113AO15541 343 aaKnown RBP11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 ITGBL1O95965 494 aaPredicted RBP11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 CCDC129Q6ZRS4 1044 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 MRIQ9BWK5 157 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
TOPBP1-209ENST00000513818 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 PRKAB2O43741 272 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 BAG3O95817 575 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 PRKG1Q13976 671 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 APPBP2Q92624 585 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 SAP30BPQ9UHR5 308 aaKnown RBP11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 FLT1P17948 1338 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 PASKQ96RG2 1323 aa11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 BAZ2AQ9UIF9 1905 aaKnown RBP11.82□□□□□ -0.52
TOPBP1-209ENST00000513818 GPAA1O43292 621 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 PPP4CP60510 307 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 HTRA3P83110 453 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 EVX2Q03828 476 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 FSTL1Q12841 308 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 NBPF12Q5TAG4 269 aaPredicted RBP11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 MYH1P12882 1939 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
TOPBP1-209ENST00000513818 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 USP5P45974 858 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 TNNI2P48788 182 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 C1QTNF8P60827 252 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 ZNF589Q86UQ0 364 aaPredicted RBP11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 IL25Q9H293 177 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
TOPBP1-209ENST00000513818 LAMB1P07942 1786 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 PAPPA2Q9BXP8 1791 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 PLCG2P16885 1265 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 CRNKL1Q9BZJ0 848 aaKnown RBP11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
TOPBP1-209ENST00000513818 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 IGSF3O75054 1194 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 ENTPD3O75355 529 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 CYP2D6P10635 497 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 TTLL12Q14166 644 aaPredicted RBP11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 LRRFIP1Q32MZ4 808 aaKnown RBP11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 BMP2KLQ5H9B9 411 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 CST9Q5W186 159 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 MIGA2Q7L4E1 593 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 STRBPQ96SI9 672 aaKnown RBP11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 EPB41L4AQ9HCS5 686 aaPredicted RBP11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 PALD1Q9ULE6 856 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 ATRNL1Q5VV63 1379 aa11.78□□□□□ -0.52
TOPBP1-209ENST00000513818 FOXP2O15409 715 aa11.77□□□□□ -0.53
TOPBP1-209ENST00000513818 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
TOPBP1-209ENST00000513818 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
TOPBP1-209ENST00000513818 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
TOPBP1-209ENST00000513818 UBE2Q2LH0YL09 131 aa11.76□□□□□ -0.53
TOPBP1-209ENST00000513818 CHMLP26374 656 aa11.76□□□□□ -0.53
TOPBP1-209ENST00000513818 APLP1P51693 650 aa11.76□□□□□ -0.53
TOPBP1-209ENST00000513818 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
TOPBP1-209ENST00000513818 STK11IPQ8N1F8 1099 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms