RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 C17orf99Q6UX52 265 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 ATRNL1Q5VV63 1379 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 A0A1B0GUL7 405 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 LDHCP07864 332 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 RGS3P49796 1198 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
SKP2-207ENST00000513263 FCGRTP55899 365 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 ERICH6Q7L0X2 663 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
SKP2-207ENST00000513263 MEIS3Q99687 375 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 ABCF2Q9UG63 623 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 ADGRA2Q96PE1 1338 aa13.55□□□□□ -0.24
SKP2-207ENST00000513263 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
SKP2-207ENST00000513263 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
SKP2-207ENST00000513263 CTNND1O60716 968 aaKnown RBP13.54□□□□□ -0.24
SKP2-207ENST00000513263 GNAI2P04899 355 aa13.54□□□□□ -0.24
SKP2-207ENST00000513263 UBXN2AP68543 259 aa13.54□□□□□ -0.24
SKP2-207ENST00000513263 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
SKP2-207ENST00000513263 RAET1EQ8TD07 263 aa13.54□□□□□ -0.24
SKP2-207ENST00000513263 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
SKP2-207ENST00000513263 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
SKP2-207ENST00000513263 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
SKP2-207ENST00000513263 FMNL1O95466 1100 aaPredicted RBP13.53□□□□□ -0.24
SKP2-207ENST00000513263 UQCRFS1P1P0C7P4 283 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 BTDP43251 543 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 PSMC4P43686 418 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 MAP3K10Q02779 954 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
SKP2-207ENST00000513263 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
SKP2-207ENST00000513263 MYH1P12882 1939 aa13.52□□□□□ -0.24
SKP2-207ENST00000513263 GPR75-ASB3A0A0A6YYF3 556 aa13.52□□□□□ -0.25
SKP2-207ENST00000513263 TBC1D12O60347 775 aa13.52□□□□□ -0.25
SKP2-207ENST00000513263 PLCG2P16885 1265 aa13.52□□□□□ -0.25
SKP2-207ENST00000513263 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
SKP2-207ENST00000513263 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
SKP2-207ENST00000513263 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
SKP2-207ENST00000513263 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.25
SKP2-207ENST00000513263 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.25
SKP2-207ENST00000513263 MYO5AQ9Y4I1 1855 aaKnown RBP13.52□□□□□ -0.25
SKP2-207ENST00000513263 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 BCRP11274 1271 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 PTPRAP18433 802 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
SKP2-207ENST00000513263 ADORA1P30542 326 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 GRK4P32298 578 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
SKP2-207ENST00000513263 CERS3Q8IU89 383 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 SPATA5Q8NB90 893 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
SKP2-207ENST00000513263 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 CPA4Q9UI42 421 aa13.51□□□□□ -0.25
SKP2-207ENST00000513263 HERC5Q9UII4 1024 aaKnown RBP13.51□□□□□ -0.25
SKP2-207ENST00000513263 TRIM27P14373 513 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 OSBPP22059 807 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 TIMM10P62072 90 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 CAP1Q01518 475 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 MECOMQ03112 1051 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 TFCP2Q12800 502 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 PICALMQ13492 652 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 TMED8Q6PL24 325 aaPredicted RBP13.5□□□□□ -0.25
SKP2-207ENST00000513263 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 MYH8P13535 1937 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
SKP2-207ENST00000513263 BAG3O95817 575 aa13.49□□□□□ -0.25
SKP2-207ENST00000513263 MOGSQ13724 837 aa13.49□□□□□ -0.25
SKP2-207ENST00000513263 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
SKP2-207ENST00000513263 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
SKP2-207ENST00000513263 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
SKP2-207ENST00000513263 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
SKP2-207ENST00000513263 GPR108Q9NPR9 543 aa13.49□□□□□ -0.25
SKP2-207ENST00000513263 GJB1P08034 283 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
SKP2-207ENST00000513263 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
SKP2-207ENST00000513263 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 ZKSCAN2Q63HK3 967 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 FTSJ3Q8IY81 847 aaKnown RBP13.48□□□□□ -0.25
SKP2-207ENST00000513263 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 COA7Q96BR5 231 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
SKP2-207ENST00000513263 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 RAI14Q9P0K7 980 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 LRP2BPQ9P2M1 347 aa13.48□□□□□ -0.25
SKP2-207ENST00000513263 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms