RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 LRRC24Q50LG9 513 aa17.49■□□□□ 0.39
SPCS3-204ENST00000513139 UNC80Q8N2C7 3258 aa17.49■□□□□ 0.39
SPCS3-204ENST00000513139 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
SPCS3-204ENST00000513139 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
SPCS3-204ENST00000513139 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
SPCS3-204ENST00000513139 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
SPCS3-204ENST00000513139 BMP8BP34820 402 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 FLT3LGP49771 235 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 CDC42EP5Q6NZY7 148 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 CRISPLD2Q9H0B8 497 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
SPCS3-204ENST00000513139 PAK6Q9NQU5 681 aaPredicted RBP17.48■□□□□ 0.39
SPCS3-204ENST00000513139 DOCK1Q14185 1865 aa17.48■□□□□ 0.39
SPCS3-204ENST00000513139 A0A0G2JLL6 359 aaPredicted RBP17.47■□□□□ 0.39
SPCS3-204ENST00000513139 INHAP05111 366 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 FGFR2P21802 821 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 TCP10Q12799 353 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
SPCS3-204ENST00000513139 PRRT2Q7Z6L0 340 aaPredicted RBP17.47■□□□□ 0.39
SPCS3-204ENST00000513139 LRCH3Q96II8 777 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
SPCS3-204ENST00000513139 ELNP15502 786 aa17.46■□□□□ 0.39
SPCS3-204ENST00000513139 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
SPCS3-204ENST00000513139 NFIAQ12857 509 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 GDF15Q99988 308 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 ZHX2Q9Y6X8 837 aa17.45■□□□□ 0.38
SPCS3-204ENST00000513139 ATRNL1Q5VV63 1379 aa17.44■□□□□ 0.38
SPCS3-204ENST00000513139 PTPRAP18433 802 aa17.44■□□□□ 0.38
SPCS3-204ENST00000513139 NECAB2Q7Z6G3 386 aa17.44■□□□□ 0.38
SPCS3-204ENST00000513139 ANKLE1Q8NAG6 615 aa17.44■□□□□ 0.38
SPCS3-204ENST00000513139 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
SPCS3-204ENST00000513139 SLC5A1P13866 664 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 MAP3K10Q02779 954 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 SMCR8Q8TEV9 937 aaPredicted RBP17.43■□□□□ 0.38
SPCS3-204ENST00000513139 LPIN2Q92539 896 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 COA7Q96BR5 231 aa17.43■□□□□ 0.38
SPCS3-204ENST00000513139 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
SPCS3-204ENST00000513139 ENTPD3O75355 529 aa17.42■□□□□ 0.38
SPCS3-204ENST00000513139 GADL1Q6ZQY3 521 aa17.42■□□□□ 0.38
SPCS3-204ENST00000513139 IDI2Q9BXS1 227 aa17.42■□□□□ 0.38
SPCS3-204ENST00000513139 USP40Q9NVE5 1235 aa17.42■□□□□ 0.38
SPCS3-204ENST00000513139 LDHBP07195 334 aaKnown RBP17.41■□□□□ 0.38
SPCS3-204ENST00000513139 PRDX5P30044 214 aa17.41■□□□□ 0.38
SPCS3-204ENST00000513139 LRIT3Q3SXY7 679 aa17.41■□□□□ 0.38
SPCS3-204ENST00000513139 DEFB123Q8N688 67 aa17.41■□□□□ 0.38
SPCS3-204ENST00000513139 STXBP5LQ9Y2K9 1186 aa17.41■□□□□ 0.38
SPCS3-204ENST00000513139 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
SPCS3-204ENST00000513139 DDX60LQ5H9U9 1706 aaKnown RBP17.41■□□□□ 0.38
SPCS3-204ENST00000513139 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 ANP32CO43423 234 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 CTNND1O60716 968 aaKnown RBP17.4■□□□□ 0.38
SPCS3-204ENST00000513139 FAM110CQ1W6H9 321 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 ZFPM1Q8IX07 1006 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 KLHDC4Q8TBB5 520 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPCS3-204ENST00000513139 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
SPCS3-204ENST00000513139 DNAH12Q6ZR08 3092 aa17.39■□□□□ 0.38
SPCS3-204ENST00000513139 EYA2O00167 538 aa17.39■□□□□ 0.37
SPCS3-204ENST00000513139 RGS3P49796 1198 aa17.39■□□□□ 0.37
SPCS3-204ENST00000513139 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
SPCS3-204ENST00000513139 PNMA3Q9UL41 463 aa17.39■□□□□ 0.37
SPCS3-204ENST00000513139 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
SPCS3-204ENST00000513139 PLXNB2O15031 1838 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 SEMA3EO15041 775 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 HMGCRP04035 888 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
SPCS3-204ENST00000513139 C7orf61Q8IZ16 206 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 ANKRD13CQ8N6S4 541 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
SPCS3-204ENST00000513139 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
SPCS3-204ENST00000513139 GCLCP48506 637 aaPredicted RBP17.37■□□□□ 0.37
SPCS3-204ENST00000513139 PROCA1Q8NCQ7 364 aaPredicted RBP17.37■□□□□ 0.37
SPCS3-204ENST00000513139 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
SPCS3-204ENST00000513139 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
SPCS3-204ENST00000513139 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
SPCS3-204ENST00000513139 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
SPCS3-204ENST00000513139 GAKO14976 1311 aa17.37■□□□□ 0.37
SPCS3-204ENST00000513139 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
SPCS3-204ENST00000513139 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
SPCS3-204ENST00000513139 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
SPCS3-204ENST00000513139 ZSCAN29Q8IWY8 852 aaPredicted RBP17.36■□□□□ 0.37
SPCS3-204ENST00000513139 TDHQ8IZJ6 230 aa17.36■□□□□ 0.37
SPCS3-204ENST00000513139 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
SPCS3-204ENST00000513139 USP44Q9H0E7 712 aa17.36■□□□□ 0.37
SPCS3-204ENST00000513139 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
SPCS3-204ENST00000513139 MTMR10Q9NXD2 777 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms