RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 NR5A1Q13285 461 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 GOLGA8HP0CJ92 632 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 UBA7P41226 1012 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
PRDM16-207ENST00000512462 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 GRAMD1CQ8IYS0 662 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
PRDM16-207ENST00000512462 DNAI1Q9UI46 699 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 CDC25AP30304 524 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
PRDM16-207ENST00000512462 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
PRDM16-207ENST00000512462 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
PRDM16-207ENST00000512462 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 PGBD1Q96JS3 809 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 CEP131Q9UPN4 1083 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
PRDM16-207ENST00000512462 UFL1O94874 794 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 KIF18AQ8NI77 898 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 UBE2Q2LH0YL09 131 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 PFKFB1P16118 471 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 EPS15P42566 896 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 RRAGBQ5VZM2 374 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 ZSWIM5Q9P217 1185 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 KCNH3Q9ULD8 1083 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
PRDM16-207ENST00000512462 NUP88Q99567 741 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-207ENST00000512462 ERICH4A6NGS2 130 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 ZNF75DP51815 510 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 APOA5Q6Q788 366 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-207ENST00000512462 BLZF1Q9H2G9 400 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-207ENST00000512462 ZNF609O15014 1411 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 TNKSO95271 1327 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 GNG11P61952 73 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 DPCR1Q3MIW9 517 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 ZNF654Q8IZM8 581 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 RASGRP4Q8TDF6 673 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
PRDM16-207ENST00000512462 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 N4BP3O15049 544 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 BAG3O95817 575 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 DDIT3P35638 169 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 SYT10Q6XYQ8 523 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.22
PRDM16-207ENST00000512462 CPVLQ9H3G5 476 aa13.65□□□□□ -0.22
PRDM16-207ENST00000512462 EPB41L2O43491 1005 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 PPARAQ07869 468 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 ADD2P35612 726 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 TCP10Q12799 353 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 UBXN4Q92575 508 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 CCDC43Q96MW1 224 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 XPO4Q9C0E2 1151 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 LZTFL1Q9NQ48 299 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
PRDM16-207ENST00000512462 CASP1P29466 404 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 NAPAP54920 295 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 CYB5R4Q7L1T6 521 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 DEF6Q9H4E7 631 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
PRDM16-207ENST00000512462 MEGF6O75095 1541 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 RFX5P48382 616 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-207ENST00000512462 TFAP4Q01664 338 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 RESTQ13127 1097 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
PRDM16-207ENST00000512462 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms