RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ZNF341Q9BYN7 854 aa19.33■□□□□ 0.68
DDX41-214ENST00000512334 ELP3Q9H9T3 547 aa19.33■□□□□ 0.68
DDX41-214ENST00000512334 CSADQ9Y600 493 aa19.33■□□□□ 0.68
DDX41-214ENST00000512334 DOCK2Q92608 1830 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
DDX41-214ENST00000512334 HDAC1Q13547 482 aaPredicted RBP19.32■□□□□ 0.68
DDX41-214ENST00000512334 SPRYD7Q5W111 196 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.32■□□□□ 0.68
DDX41-214ENST00000512334 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 WNK4Q96J92 1243 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 ECHDC1Q9NTX5 307 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 PAG1Q9NWQ8 432 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 TSKSQ9UJT2 592 aa19.32■□□□□ 0.68
DDX41-214ENST00000512334 CA12O43570 354 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 PPP4CP60510 307 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 VGLL4Q14135 290 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
DDX41-214ENST00000512334 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 HAUS7Q99871 368 aa19.31■□□□□ 0.68
DDX41-214ENST00000512334 DDTLA6NHG4 134 aaPredicted RBP19.3■□□□□ 0.68
DDX41-214ENST00000512334 LBX1P52954 281 aa19.3■□□□□ 0.68
DDX41-214ENST00000512334 DYNLL1P63167 89 aaKnown RBP19.3■□□□□ 0.68
DDX41-214ENST00000512334 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
DDX41-214ENST00000512334 TSHZ3Q63HK5 1081 aa19.3■□□□□ 0.68
DDX41-214ENST00000512334 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
DDX41-214ENST00000512334 TGFBRAP1Q8WUH2 860 aa19.3■□□□□ 0.68
DDX41-214ENST00000512334 ZKSCAN4Q969J2 545 aaPredicted RBP19.3■□□□□ 0.68
DDX41-214ENST00000512334 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
DDX41-214ENST00000512334 RWDD1Q9H446 243 aaPredicted RBP19.3■□□□□ 0.68
DDX41-214ENST00000512334 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
DDX41-214ENST00000512334 ZBTB48P10074 688 aaPredicted RBP19.29■□□□□ 0.68
DDX41-214ENST00000512334 HSPA8P11142 646 aaKnown RBP19.29■□□□□ 0.68
DDX41-214ENST00000512334 PDE6AP16499 860 aa19.29■□□□□ 0.68
DDX41-214ENST00000512334 SREBF2Q12772 1141 aa19.29■□□□□ 0.68
DDX41-214ENST00000512334 TMED8Q6PL24 325 aaPredicted RBP19.29■□□□□ 0.68
DDX41-214ENST00000512334 OPTNQ96CV9 577 aa19.29■□□□□ 0.68
DDX41-214ENST00000512334 INPP5BP32019 993 aa19.28■□□□□ 0.68
DDX41-214ENST00000512334 CERS3Q8IU89 383 aa19.28■□□□□ 0.68
DDX41-214ENST00000512334 MAPKAPK5Q8IW41 473 aa19.28■□□□□ 0.68
DDX41-214ENST00000512334 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
DDX41-214ENST00000512334 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.28■□□□□ 0.684e-6■□□□□ 10
DDX41-214ENST00000512334 RNF186Q9NXI6 227 aa19.28■□□□□ 0.68
DDX41-214ENST00000512334 ZNF532Q9HCE3 1301 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 MAGEB6P1A0A0J9YX57 407 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 MANSC4A6NHS7 340 aaPredicted RBP19.27■□□□□ 0.68
DDX41-214ENST00000512334 TRPA1O75762 1119 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 GJA5P36382 358 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 USP5P45974 858 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 OTUD5Q96G74 571 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 SNCAIPQ9Y6H5 919 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 ATRNL1Q5VV63 1379 aa19.27■□□□□ 0.68
DDX41-214ENST00000512334 FLT1P17948 1338 aa19.26■□□□□ 0.67
DDX41-214ENST00000512334 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
DDX41-214ENST00000512334 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 CDK5RAP2Q96SN8 1893 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
DDX41-214ENST00000512334 ERC2O15083 957 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 SLURP2P0DP57 97 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 MX1P20591 662 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 TM4SF4P48230 202 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 COL13A1Q5TAT6 717 aaPredicted RBP19.25■□□□□ 0.67
DDX41-214ENST00000512334 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.25■□□□□ 0.67
DDX41-214ENST00000512334 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 SAGE1Q9NXZ1 904 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 SAP30BPQ9UHR5 308 aaKnown RBP19.25■□□□□ 0.67
DDX41-214ENST00000512334 ZNF112Q9UJU3 913 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 FOCADQ5VW36 1801 aa19.25■□□□□ 0.67
DDX41-214ENST00000512334 SPDYE5A6NIY4 337 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 FAM196BA6NMK8 535 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 IGHDP01880 384 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 ADD2P35612 726 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 INHBEP58166 350 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 B4GALNT3Q6L9W6 998 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
DDX41-214ENST00000512334 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
DDX41-214ENST00000512334 TCRBV5S4A2TA0A5A2 114 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 SLFNL1Q499Z3 407 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 RIOK1Q9BRS2 568 aaKnown RBP19.23■□□□□ 0.67
DDX41-214ENST00000512334 TRIM34Q9BYJ4 488 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 PI4KBQ9UBF8 816 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 PALD1Q9ULE6 856 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 MYH7P12883 1935 aa19.23■□□□□ 0.67
DDX41-214ENST00000512334 PHF20L1A8MW92 1017 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 TBC1D12O60347 775 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 GLRX3O76003 335 aaKnown RBP19.22■□□□□ 0.67
DDX41-214ENST00000512334 HLA-DOAP06340 250 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 GTF2A2P52657 109 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 NOL9Q5SY16 702 aaKnown RBP19.22■□□□□ 0.67
DDX41-214ENST00000512334 IFNL1Q8IU54 200 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 SMC5Q8IY18 1101 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 CRNKL1Q9BZJ0 848 aaKnown RBP19.22■□□□□ 0.67
DDX41-214ENST00000512334 LNPKQ9C0E8 428 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 PICK1Q9NRD5 415 aa19.22■□□□□ 0.67
DDX41-214ENST00000512334 CHGBP05060 677 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 PPATQ06203 517 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 PPIL2Q13356 520 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms